RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 PIAS2O75928 621 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 THBS4P35443 961 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 DBX2Q6ZNG2 339 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 TP53I13Q8NBR0 393 aaPredicted RBP17.25■□□□□ 0.35
COL27A1-207ENST00000494090 PP6455Q8WZ26 134 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 MFRPQ9BY79 579 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 PARP12Q9H0J9 701 aaKnown RBP17.25■□□□□ 0.35
COL27A1-207ENST00000494090 AK3Q9UIJ7 227 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 NME2P1O60361 137 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 SDHBP21912 280 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 BAP18Q8IXM2 172 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 DEFB108BQ8NET1 73 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 OTOSQ8NHW6 89 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 OR8B4Q96RC9 309 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 RNF32Q9H0A6 362 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 CLEC1BQ9P126 229 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 SLC23A1Q9UHI7 598 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 EXOGQ9Y2C4 368 aaKnown RBP17.25■□□□□ 0.35
COL27A1-207ENST00000494090 FAM96BQ9Y3D0 163 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF724A8MTY0 619 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 DVL1O14640 695 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 F2RP25116 425 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 DVL1P1P54792 670 aaPredicted RBP17.25■□□□□ 0.35
COL27A1-207ENST00000494090 PNLIPRP3Q17RR3 467 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 LINC00303Q3SY05 128 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 SLC16A12Q6ZSM3 486 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 YIF1AO95070 293 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 GNB2P62879 340 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 ANKRD16Q6P6B7 361 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 MED9Q9NWA0 146 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 PPP1R3CQ9UQK1 317 aa17.25■□□□□ 0.35
COL27A1-207ENST00000494090 M0QZ24 198 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 LINC01565O15544 149 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 TNFRSF1AP19438 455 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 ABCD3P28288 659 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 ELLP55199 621 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-207ENST00000494090 ACOT6Q3I5F7 207 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-207ENST00000494090 MRGPRX3Q96LB0 322 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 PLPP2O43688 288 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 OR5H8P0DN80 308 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 C21orf58P58505 322 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 BTLAQ7Z6A9 289 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 BATF2Q8N1L9 274 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 RAB27BO00194 218 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 IGHA2P01877 340 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 SOX7Q9BT81 388 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 ACTR3CQ9C0K3 210 aaPredicted RBP17.24■□□□□ 0.35
COL27A1-207ENST00000494090 OSGIN2Q9Y236 505 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 MICAL3Q7RTP6 2002 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 FAM157BP0CG42 384 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 CBR1P16152 277 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 GNB1P62873 340 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 EID2BQ96D98 161 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 C20orf24Q9BUV8 137 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF391Q9UJN7 358 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 CDK5RAP2Q96SN8 1893 aa17.24■□□□□ 0.35
COL27A1-207ENST00000494090 TMEM11P17152 192 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 PCMT1P22061 227 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 RPS16P62249 146 aaKnown RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 TAF9Q16594 264 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 LILRA6Q6PI73 481 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 GLDNQ6ZMI3 551 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 Q8IYB0 196 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 PLSCR3Q9NRY6 295 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 SCN9AQ15858 1988 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 ADAM10O14672 748 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 ZNF121P58317 390 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 KIAA0141Q14154 515 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 GFRALQ6UXV0 394 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 CYC1P08574 325 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 HOXC4P09017 264 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 CD80P33681 288 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 OPRM1P35372 400 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 SSX1Q16384 188 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 PXDC1Q5TGL8 231 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 OSR2Q8N2R0 312 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 GALNT16Q8N428 558 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 OR11G2Q8NGC1 345 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 KTI12Q96EK9 354 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 SLC17A5Q9NRA2 495 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 MTCH1Q9NZJ7 389 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 HAAOP46952 286 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 C9orf50Q5SZB4 431 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 ADAM5Q6NVV9 412 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 RELL2Q8NC24 303 aaPredicted RBP17.23■□□□□ 0.35
COL27A1-207ENST00000494090 TRGV5A0A0B4J1U4 118 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 SERPINE3A8MV23 424 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 TIGITQ495A1 244 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 TMEM268Q5VZI3 342 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 SLC25A26Q70HW3 274 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 FN3KRPQ9HA64 309 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 MMP25Q9NPA2 562 aa17.23■□□□□ 0.35
COL27A1-207ENST00000494090 DOCK1Q14185 1865 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 XKRY2A2RUG3 117 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 LRP3O75074 770 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 PRSS23O95084 383 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 CISD3P0C7P0 127 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 B4GALT1P15291 398 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 PI3P19957 117 aa17.22■□□□□ 0.35
COL27A1-207ENST00000494090 UBE2IP63279 158 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms