RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ZBTB34Q8NCN2 500 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 PPP1R35Q8TAP8 253 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 SLC6A7Q99884 636 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 C20orf27Q9GZN8 174 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 TUBB1Q9H4B7 451 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 WFDC1Q9HC57 220 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 MTCH1Q9NZJ7 389 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 NLKQ9UBE8 527 aa10.33□□□□□ -0.76
BRCA1-222ENST00000493919 LOC105371242A0A075B767 164 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 IGHV1-45A0A0A0MS14 117 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF195O14628 629 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 UBBP0CG47 229 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 TIA1P31483 386 aaKnown RBP eCLIP10.32□□□□□ -0.76
BRCA1-222ENST00000493919 RAB11AP62491 216 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 RPS27AP62979 156 aaKnown RBP10.32□□□□□ -0.76
BRCA1-222ENST00000493919 UBA52P62987 128 aaKnown RBP10.32□□□□□ -0.76
BRCA1-222ENST00000493919 RPL38P63173 70 aaKnown RBP10.32□□□□□ -0.76
BRCA1-222ENST00000493919 HERPUD1Q15011 391 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 EIPR1Q53HC9 387 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 LCN8Q6JVE9 175 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF562Q6V9R5 426 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 MRPL41Q8IXM3 137 aaKnown RBP10.32□□□□□ -0.76
BRCA1-222ENST00000493919 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 OR1K1Q8NGR3 316 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 OR13C9Q8NGT0 318 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 GNPDA2Q8TDQ7 276 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 RNF133Q8WVZ7 376 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 ZBTB8AQ96BR9 441 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 SFRP2Q96HF1 295 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 SULT4A1Q9BR01 284 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 FNDC11Q9BVV2 318 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 CACNG6Q9BXT2 260 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 PRODH2Q9UF12 536 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 A4GNTQ9UNA3 340 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 RAP2CQ9Y3L5 183 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 ATRXP46100 2492 aa10.32□□□□□ -0.76
BRCA1-222ENST00000493919 A0A1W2PR48 441 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR5H14A6NHG9 310 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 HSPB2A8KAH6 182 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 HMSDA8MTL9 139 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 TGFBR3LH3BV60 316 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 RGS11O94810 467 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 YIF1AO95070 293 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CST4P01036 141 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CPN1P15169 458 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 NFYAP23511 347 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 LGALS7P47929 136 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CSNK2A1P68400 391 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 KIAA0141Q14154 515 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 LY6DQ14210 128 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 PCOLCEQ15113 449 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 HSPB2Q16082 182 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 GDF7Q7Z4P5 450 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 SLC30A8Q8IWU4 369 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR4N5Q8IXE1 308 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 H1FOOQ8IZA3 346 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF614Q8N883 585 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 PLPP5Q8NEB5 264 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CSNK2A3Q8NEV1 391 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR1L6Q8NGR2 347 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR14L1PQ8NHC6 308 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM163Q8TC26 289 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 DAZAP1Q96EP5 407 aaKnown RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 TP53RKQ96S44 253 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 FAAP24Q9BTP7 215 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CLMPQ9H6B4 373 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 MTHFD2LQ9H903 347 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 LRTM1Q9HBL6 345 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CYSLTR2Q9NS75 346 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 COPS7AQ9UBW8 275 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 URGCP-MRPS24S4R325 110 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 MED13Q9UHV7 2174 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 LOC102723996A0A087X1L8 192 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 IGKV3D-11A0A0A0MRZ8 115 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 TGIF2-C20orf24A0A0A6YYL0 155 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR11H12B2RN74 326 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 H3BN98 237 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 FGF17O60258 216 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 IFNA5P01569 189 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CELA2AP08217 269 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 IL3P08700 152 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 GADD45AP24522 165 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 RAB7AP51149 207 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 ISL1P61371 349 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 RAE1P78406 368 aaKnown RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 AIMP2Q13155 320 aaKnown RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 LINC00303Q3SY05 128 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 RNFT1Q5M7Z0 435 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 GSG1LQ6UXU4 331 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 CD163Q86VB7 1156 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 HIST3H2BBQ8N257 126 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 GALNT16Q8N428 558 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR11H1Q8NG94 326 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 OR11H2Q8NH07 326 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 SMPDL3BQ92485 455 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 NAA11Q9BSU3 229 aaPredicted RBP10.31□□□□□ -0.76
BRCA1-222ENST00000493919 RSRP1Q9BUV0 290 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 UBQLN3Q9H347 655 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 HRH4Q9H3N8 390 aa10.31□□□□□ -0.76
BRCA1-222ENST00000493919 RALYQ9UKM9 306 aaKnown RBP10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms