RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 CDCA4Q9BXL8 241 aa11.56□□□□□ -0.56
PRPF40A-211ENST00000493468 WNT10AQ9GZT5 417 aa11.56□□□□□ -0.56
PRPF40A-211ENST00000493468 OPA3Q9H6K4 179 aa11.56□□□□□ -0.56
PRPF40A-211ENST00000493468 CYB5R1Q9UHQ9 305 aa11.56□□□□□ -0.56
PRPF40A-211ENST00000493468 TMEM5Q9Y2B1 443 aa11.56□□□□□ -0.56
PRPF40A-211ENST00000493468 DCTN6O00399 190 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SOCS2O14508 198 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 FFAR1O14842 300 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 PTP4A3O75365 173 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 AMY2BP19961 511 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 PAICSP22234 425 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 OTX1P32242 354 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 CDKN2AP42771 156 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SELENOWP63302 87 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SLC35A2P78381 396 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 EGFEM1PQ0D2K5 195 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 IKZF1Q13422 519 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 DCTN2Q13561 401 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 BLMHQ13867 455 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 RFX4Q33E94 735 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SNAI3Q3KNW1 292 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SLC36A3Q495N2 470 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 WDR82Q6UXN9 313 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 LINC00346Q8IVM7 164 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 OR5D13Q8NGL4 314 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 LZICQ8WZA0 190 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 H1FXQ92522 213 aaKnown RBP11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SPTSSAQ969W0 71 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 TSSK2Q96PF2 358 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 ANKRD19PQ9H560 264 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 SIGLEC7Q9Y286 467 aa11.55□□□□□ -0.56
PRPF40A-211ENST00000493468 E9PQ18 207 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 TIPRLO75663 272 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 IFNW1P05000 195 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 KDELR2P33947 212 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 NAA10P41227 235 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 CENPAP49450 140 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 GSK3BP49841 420 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 RPS6KA3P51812 740 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 CAV3P56539 151 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 KRTAP10-11P60412 298 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 CYLC2Q14093 348 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 LRRC23Q53EV4 343 aaPredicted RBP11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 RABL3Q5HYI8 236 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 DPY19L2P2Q6ZN68 376 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 WDR86Q86TI4 376 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 OR56B2PQ8NGI1 322 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 OR9Q1Q8NGQ5 310 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 OR2AJ1Q8NGZ0 328 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 OR2AE1Q8NHA4 323 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 PIFOQ8TCI5 191 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 TPD52L3Q96J77 140 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 TLNRD1Q9H1K6 362 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 RHCGQ9UBD6 479 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 B9D1Q9UPM9 204 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 IER3IP1Q9Y5U9 82 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 CAPN7Q9Y6W3 813 aa11.54□□□□□ -0.56
PRPF40A-211ENST00000493468 NKX6-3A6NJ46 265 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 VGLL3A8MV65 326 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 J3KTA2 159 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 SELLP14151 372 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 MSX2P35548 267 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 DDOSTP39656 456 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 YAP1P46937 504 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 BMXP51813 675 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 MAGOHP61326 146 aaKnown RBP11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 HABP2Q14520 560 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 GLYATL3Q5SZD4 288 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 TBPL2Q6SJ96 375 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 DRAM2Q6UX65 266 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 ZNF788Q6ZQV5 615 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 DPY19L4Q7Z388 723 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 OR6V1Q8N148 313 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 OR1M1Q8NGA1 313 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 OR8S1Q8NH09 359 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 MED30Q96HR3 178 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 DDOQ99489 341 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 NKX3-1Q99801 234 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 HAO2Q9NYQ3 351 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 ADA2Q9NZK5 511 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 SLC25A10Q9UBX3 287 aaPredicted RBP11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 KCNG2Q9UJ96 466 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 SNX13Q9Y5W8 968 aa11.53□□□□□ -0.56
PRPF40A-211ENST00000493468 STAB2Q8WWQ8 2551 aa11.52□□□□□ -0.56
PRPF40A-211ENST00000493468 A0A1W2PQ09 198 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 ANKRD30BLA7E2S9 258 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 FXYD1O00168 92 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 ANGPTL7O43827 346 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 ANOS1P23352 680 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 FXYD6P3P58550 94 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 CSNK2BP67870 215 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 CD83Q01151 205 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 RRM2BQ7LG56 351 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 ZBTB46Q86UZ6 589 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 OR10Z1Q8NGY1 313 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 SPSB4Q96A44 273 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 ZBTB9Q96C00 473 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 TLCD1Q96CP7 247 aa11.52□□□□□ -0.57
PRPF40A-211ENST00000493468 SEH1LQ96EE3 360 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms