RNA–Protein interactions for RNA: ENST00000493341.1

VPS13A-212, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,001 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-212ENST00000493341 HSPD1P10809 573 aaKnown RBP3.35□□□□□ -1.87
VPS13A-212ENST00000493341 ZBTB25P24278 435 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 MYCNOSP40205 109 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 P2RY2P41231 377 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 CYB561P49447 251 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 RGS6P49758 472 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 KRTAP10-11P60412 298 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 TSPAN5P62079 268 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 SLC35A1P78382 337 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 IGLV3-21P80748 117 aaPredicted RBP3.35□□□□□ -1.87
VPS13A-212ENST00000493341 PSG5Q15238 335 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 CHRFAM7AQ494W8 412 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 RESP18Q5W5W9 173 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 LRRC6Q86X45 466 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 CRLF3Q8IUI8 442 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 FAM222BQ8WU58 562 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 TNFRSF14Q92956 283 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 NTAN1Q96AB6 310 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 RNF185Q96GF1 192 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 ISYNA1Q9NPH2 558 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 MED4Q9NPJ6 270 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF226Q9NYT6 803 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 ADAMTSL3P82987 1691 aa3.35□□□□□ -1.87
VPS13A-212ENST00000493341 F8VZ95 297 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 TTC4O95801 387 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 CD3GP09693 182 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 ZDHHC11BP0C7U3 371 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 LOXP28300 417 aaPredicted RBP3.34□□□□□ -1.87
VPS13A-212ENST00000493341 TEAD1P28347 426 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 NDUFA8P51970 172 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 TAS2R46P59540 309 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 PRR3P79522 188 aaKnown RBP3.34□□□□□ -1.87
VPS13A-212ENST00000493341 OR4D1Q15615 310 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 ARL9Q6T311 187 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 ABCA7Q8IZY2 2146 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 FAM71E2Q8N5Q1 922 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 OR10Z1Q8NGY1 313 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 RXFP2Q8WXD0 754 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 HAUS1Q96CS2 278 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 ZNF251Q9BRH9 671 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 SPNS1Q9H2V7 528 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 ACOT13Q9NPJ3 140 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 CD84Q9UIB8 345 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 RAB23Q9ULC3 237 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 WIF1Q9Y5W5 379 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 CCDC18Q5T9S5 1454 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 CDC42BPBQ9Y5S2 1711 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 CASKIN1Q8WXD9 1431 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 KIF14Q15058 1648 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 PREX2Q70Z35 1606 aa3.34□□□□□ -1.87
VPS13A-212ENST00000493341 PCF11O94913 1555 aaKnown RBP3.34□□□□□ -1.87
VPS13A-212ENST00000493341 FAM240AA0A1B0GVK7 77 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 MKRN2OSH3BPM6 223 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 GP1BAP07359 652 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 OR5AL1P0C617 328 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 THRAP10827 490 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 RAB3AP20336 220 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 MAGEA3P43357 314 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 XKP51811 444 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 CDKN2DP55273 166 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 UBE2NP61088 152 aaKnown RBP3.34□□□□□ -1.88
VPS13A-212ENST00000493341 C2orf54Q08AI8 447 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 PIGHQ14442 188 aaPredicted RBP3.34□□□□□ -1.88
VPS13A-212ENST00000493341 GINS1Q14691 196 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 HES5Q5TA89 166 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 FBXW12Q6X9E4 464 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 GTSCR1Q86UQ5 136 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 GPD1LQ8N335 351 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 NPBQ8NG41 125 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 RDH5Q92781 318 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 GALNT14Q96FL9 552 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 ALS2CR12Q96Q35 445 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 ANGPTL4Q9BY76 406 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 ZNF442Q9H7R0 627 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 RRAGDQ9NQL2 400 aaPredicted RBP3.34□□□□□ -1.88
VPS13A-212ENST00000493341 TMEM100Q9NV29 134 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 RHBDL2Q9NX52 303 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 PSG8Q9UQ74 426 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 FADS3Q9Y5Q0 445 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 PUS1Q9Y606 427 aaKnown RBP eCLIP3.34□□□□□ -1.88
VPS13A-212ENST00000493341 BCORL1Q5H9F3 1711 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 CDC42BPAQ5VT25 1732 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 FYCO1Q9BQS8 1478 aa3.34□□□□□ -1.88
VPS13A-212ENST00000493341 REREQ9P2R6 1566 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 CDK13Q14004 1512 aaKnown RBP3.33□□□□□ -1.88
VPS13A-212ENST00000493341 SMIM26A0A096LP01 95 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 A0A0J9YXV3 536 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 SGCEO43556 437 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 GABARAPO95166 117 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 PTHP01270 115 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 HOXB6P17509 224 aaKnown RBP3.33□□□□□ -1.88
VPS13A-212ENST00000493341 DSTNP60981 165 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 HMGCS1Q01581 520 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 CAPRIN1Q14444 709 aaKnown RBP3.33□□□□□ -1.88
VPS13A-212ENST00000493341 GUSBP1Q15486 140 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 BHLHA15Q7RTS1 189 aaPredicted RBP3.33□□□□□ -1.88
VPS13A-212ENST00000493341 DCAF4L2Q8NA75 395 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 SUMF2Q8NBJ7 301 aa3.33□□□□□ -1.88
VPS13A-212ENST00000493341 OR2Y1Q8NGV0 311 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms