RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 VSX2P58304 361 aaPredicted RBP2.33□□□□□ -2.04
SNX13-209ENST00000492626 DEFA6Q01524 100 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 KRTAP1-1Q07627 177 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 STK11Q15831 433 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 SOHLH1Q5JUK2 328 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 SPECC1LQ69YQ0 1117 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 TMEM150AQ86TG1 271 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 ASCC1Q8N9N2 400 aaKnown RBP2.33□□□□□ -2.04
SNX13-209ENST00000492626 NR4A3Q92570 626 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 APH1AQ96BI3 265 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 DYNLL2Q96FJ2 89 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 ATP6V1G3Q96LB4 118 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 MICU1Q9BPX6 476 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 KRTAP9-9Q9BYP9 154 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 UCK2Q9BZX2 261 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 BEX1Q9HBH7 125 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 LYRM4Q9HD34 91 aa2.33□□□□□ -2.04
SNX13-209ENST00000492626 FGF20Q9NP95 211 aaPredicted RBP2.33□□□□□ -2.04
SNX13-209ENST00000492626 DNHD1Q96M86 4753 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 XKRYO14609 159 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 AIREO43918 545 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 SLC25A16P16260 332 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ZNF43P17038 809 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ARR3P36575 388 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 MDH2P40926 338 aaKnown RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 KLK7P49862 253 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 RORCP51449 518 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 DIO3P55073 304 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 DLX1P56177 255 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 DAOAP59103 153 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 TFF3Q07654 80 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 LOXL1Q08397 574 aaPredicted RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 BCL2A1Q16548 175 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 Q1RN00 199 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 FAM83EQ2M2I3 478 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 TCAIMQ8N3R3 496 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 CBR4Q8N4T8 237 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 SNX31Q8N9S9 440 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 OPALINQ96PE5 141 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ANKRD60Q9BZ19 345 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 RHBDL2Q9NX52 303 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 F8P00451 2351 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 TRAV6A0A075B6T7 132 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 LOC100653049A0A140TA62 436 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 LINC00854A0A1B0GVQ3 168 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 F6UB75 175 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 PSMD11O00231 422 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 PLPP1O14494 284 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 FCN3O75636 299 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 KRT34O76011 436 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 GPR6P46095 362 aaPredicted RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 NKAIN1Q4KMZ8 207 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 LCE5AQ5TCM9 118 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 UBE2UQ5VVX9 321 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 RSBN1Q5VWQ0 802 aaPredicted RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 H3F3CQ6NXT2 135 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ZNF620Q6ZNG0 422 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 SLC25A48Q6ZT89 311 aaKnown RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 BHLHA9Q7RTU4 235 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 SNX20Q7Z614 316 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ZNF525Q8N782 197 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ACOT11Q8WXI4 607 aaPredicted RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 NRGNQ92686 78 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ALS2CR12Q96Q35 445 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 STOML2Q9UJZ1 356 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 A0A1W2PPV9 198 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 FAM92AA1XBS5 289 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 E2F6O75461 281 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 TGM6O95932 706 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 IVLP07476 585 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 F2RP25116 425 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 TPM4P67936 248 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 SP4Q02446 784 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 LRRC10Q5BKY1 277 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 GPR107Q5VW38 600 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 C6orf89Q6UWU4 347 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 MBOAT1Q6ZNC8 495 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 RNF165Q6ZSG1 346 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 LHFPL3Q86UP9 236 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ZBTB8OSQ8IWT0 167 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ARHGAP18Q8N392 663 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 C19orf60Q96EN9 201 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 OXGR1Q96P68 337 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 ZNF184Q99676 751 aaPredicted RBP2.32□□□□□ -2.04
SNX13-209ENST00000492626 SLC39A1Q9NY26 324 aa2.32□□□□□ -2.04
SNX13-209ENST00000492626 CACNA1DQ01668 2161 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 TRAV17A0A0B4J275 112 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SLC5A10A0PJK1 596 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 CIB4A0PJX0 185 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 TSPAN11A1L157 253 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 GOLGA8IPA6NC78 632 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 EPM2AB3EWF7 344 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 GOLGA8MH3BSY2 632 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 RDH16O75452 317 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SUPT3HO75486 399 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 IGHV2-5P01817 119 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 RCVRNP35243 200 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 SERPINB5P36952 375 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 C1orf100Q5SVJ3 147 aa2.31□□□□□ -2.04
SNX13-209ENST00000492626 TPTE2P1Q5T6R2 138 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms