RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 CAPZA1P52907 286 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 TMEM50BP56557 158 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 SLC35A1P78382 337 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 ENDOGQ14249 297 aaKnown RBP10.95□□□□□ -0.66
HMGN1-220ENST00000492280 GTPBP8Q8N3Z3 284 aaPredicted RBP10.95□□□□□ -0.66
HMGN1-220ENST00000492280 OR10R2Q8NGX6 335 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 GSX2Q9BZM3 304 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 PLEK2Q9NYT0 353 aa10.95□□□□□ -0.66
HMGN1-220ENST00000492280 EEF1E1-BLOC1S5C9J1V9 151 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 LGALS8O00214 317 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 CDC14BO60729 498 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 RLN2P04090 185 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 TDGF1P13385 188 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 RGS19P49795 217 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 AANATQ16613 207 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 MICBQ29980 383 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 BEST3Q8N1M1 668 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 BOLLQ8N9W6 283 aaKnown RBP10.94□□□□□ -0.66
HMGN1-220ENST00000492280 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 MFFQ9GZY8 342 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 FANCFQ9NPI8 374 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 HDGFL3Q9Y3E1 203 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 PRR14LQ5THK1 2151 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 LOC102723996A0A087X1L8 192 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 TMEM14DPA8MWL7 114 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 RP2O75695 350 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 TRAPPC6AO75865 159 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 BPNT1O95861 308 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 CD74P04233 296 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 B4GALT1P15291 398 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 FOLR3P41439 243 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 ATP1B3P54709 279 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 RAB14P61106 215 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 HGFACQ04756 655 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 IL11RAQ14626 422 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 HIST3H3Q16695 136 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 RSPO1Q2MKA7 263 aaPredicted RBP10.94□□□□□ -0.66
HMGN1-220ENST00000492280 CLLU1Q5K131 121 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 OPN5Q6U736 354 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 OR9K2Q8NGE7 335 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 OR2Y1Q8NGV0 311 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 FBXO17Q96EF6 278 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 ULBP2Q9BZM5 246 aa10.94□□□□□ -0.66
HMGN1-220ENST00000492280 NTN3O00634 580 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ANGPTL7O43827 346 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PMS2P2O95744 297 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PDGFAP04085 211 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ERCC1P07992 297 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CD37P11049 281 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 MSR1P21757 451 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CASRP41180 1078 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 H3F3AP84243 136 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 DHODHQ02127 395 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 GK2Q14410 553 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 UBE2V2Q15819 145 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 NHLRC3Q5JS37 347 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 WIPI1Q5MNZ9 446 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 C9orf135Q5VTT2 229 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CRIP3Q6Q6R5 217 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 C1orf210Q8IVY1 113 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 OR14L1PQ8NHC6 308 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 LRRC20Q8TCA0 184 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 SLC25A43Q8WUT9 341 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 NABP1Q96AH0 204 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZBTB8AQ96BR9 441 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF75AQ96N20 296 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 HDHD3Q9BSH5 251 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ST6GALNAC5Q9BVH7 336 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 SCPEP1Q9HB40 452 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 SPTBN2O15020 2390 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PINLYPA6NC86 204 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 EIF1P41567 113 aaKnown RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CHAF1BQ13112 559 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF529Q6P280 563 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 GSG1LQ6UXU4 331 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 TIPARPQ7Z3E1 657 aaKnown RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZIC4Q8N9L1 334 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 BHLHE23Q8NDY6 225 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 OR14K1Q8NGZ2 314 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 AKR7LQ8NHP1 331 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 RAB3CQ96E17 227 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 WDR54Q9H977 334 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 GPR173Q9NS66 373 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 DEPPQ9NTK1 212 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PIGLQ9Y2B2 252 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 RP1L1Q8IWN7 2480 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CCDC163A0A0D9SF12 145 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 C13orf42A0A1B0GVH6 325 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 DISC1C4P0D8 188 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 H3BUI4 141 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 SULT1C2O00338 296 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CXCL13O43927 109 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 NMBP08949 121 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 TCN2P20062 427 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 SUCLG1P53597 346 aaKnown RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 IL13RA1P78552 427 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZFP36L1Q07352 338 aaKnown RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ARFRP1Q13795 201 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 SLC9A3R2Q15599 337 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF774Q6NX45 483 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms