RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 PURGQ9UJV8 347 aaKnown RBP12.77□□□□□ -0.37
CDC42SE1-205ENST00000491825 DIMT1Q9UNQ2 313 aaKnown RBP12.77□□□□□ -0.37
CDC42SE1-205ENST00000491825 R4GMQ9 66 aa12.77□□□□□ -0.37
CDC42SE1-205ENST00000491825 A0A0U1RQV5 110 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 TMEM269A0A1B0GVZ9 245 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 LRP5LA4QPB2 252 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 SLC1A7O00341 560 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 MT-ND5P03915 603 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 CCDC159P0C7I6 412 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 SELEP16581 610 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 IL2RGP31785 369 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 ZNF92Q03936 586 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 RIN1Q13671 783 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 HLXQ14774 488 aaPredicted RBP12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 NKPD1Q17RQ9 610 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 C6orf141Q5SZD1 244 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 LIPNQ5VXI9 398 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 FAM57BQ71RH2 274 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 PGAP1Q75T13 922 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 MRPL21Q7Z2W9 205 aaKnown RBP12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 OR8B12Q8NGG6 310 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 ITFG2Q969R8 447 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 CMBLQ96DG6 245 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 ALG8Q9BVK2 526 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 ACOXLQ9NUZ1 547 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 TAAR3PQ9P1P4 343 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 ZNF319Q9P2F9 582 aa12.76□□□□□ -0.37
CDC42SE1-205ENST00000491825 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.76□□□□□ -0.374e-10■■□□□ 12
CDC42SE1-205ENST00000491825 A0A1B0GWJ7 208 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 PLSCR5A0PG75 271 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 C5orf63A6NC05 138 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 IQCF6A8MYZ5 107 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 LOC110117498-PIK3R3F6TDL0 507 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 MAGEB4O15481 346 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 XPNPEP2O43895 674 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 TIMM8AO60220 97 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 PNPP00491 289 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 TGFAP01135 160 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 IGLV3-1P01715 115 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 ADH4P08319 380 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 LIMS3P0CW19 117 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 LIMS4P0CW20 117 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 ALDH3B1P43353 468 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 SRSF2Q01130 221 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 MFGE8Q08431 387 aaPredicted RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 MRPL28Q13084 256 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 TIGD6Q17RP2 521 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 CR1LQ2VPA4 569 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 BPIFB6Q8NFQ5 453 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 OR2AE1Q8NHA4 323 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 GGHQ92820 318 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 C1orf159Q96HA4 380 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 TMEM80Q96HE8 168 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 REEP6Q96HR9 211 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 PGAM5Q96HS1 289 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 CNBD2Q96M20 576 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 PBOV1Q9GZY1 135 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 G6PC2Q9NQR9 355 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 EXOSC1Q9Y3B2 195 aaKnown RBP12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 SNX5Q9Y5X3 404 aa12.75□□□□□ -0.37
CDC42SE1-205ENST00000491825 hCG_38984A0A1B0GV85 526 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 TBX1O43435 398 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 ERCC1P07992 297 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 ADRA2AP08913 450 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 MYL12AP19105 171 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 ST3GAL4Q11206 333 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 MED21Q13503 144 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 OR8B8Q15620 311 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 PCGF3Q3KNV8 242 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 TP53I3Q53FA7 332 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 BCL2L15Q5TBC7 163 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 FDX2Q6P4F2 183 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 LHFPL3Q86UP9 236 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 RORBQ92753 470 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 HPS1Q92902 700 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 RNF166Q96A37 237 aaPredicted RBP12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 SGK3Q96BR1 496 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 PELI1Q96FA3 418 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 DIRC2Q96SL1 478 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 C19orf24Q9BVV8 132 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 BRD7Q9NPI1 651 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 NKIRAS2Q9NYR9 191 aa12.74□□□□□ -0.37
CDC42SE1-205ENST00000491825 ZSCAN5BA6NJL1 495 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 LYNX1G3V0Z9 82 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 TTRP02766 147 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 LYNX1P0DP58 116 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 HNF1AP20823 631 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 DDOSTP39656 456 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 ZNF81P51508 661 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 CHN2P52757 468 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 OR12D2P58182 307 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 SLC35A2P78381 396 aa12.73□□□□□ -0.37
CDC42SE1-205ENST00000491825 FAM3AP98173 230 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms