RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 MED13LQ71F56 2210 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ZNF469Q96JG9 3925 aaPredicted RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 A0A0U1RQV5 110 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ACOD1A6NK06 481 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 RNF223E7ERA6 249 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 P2RY10O00398 339 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 SMAD7O15105 426 aaKnown RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 RP2O75695 350 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 CD55P08174 381 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 LIMS3P0CW19 117 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 LIMS4P0CW20 117 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 MYF6P23409 242 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 TNFSF4P23510 183 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 CFL1P23528 166 aaKnown RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 COL8A2P25067 703 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 KIR3DL2P43630 455 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ETV1P50549 477 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 GALEQ14376 348 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 OR8B8Q15620 311 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 AHSA2Q719I0 299 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ELMOD2Q8IZ81 293 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ZNF786Q8N393 782 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 PRSS35Q8N3Z0 413 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 OR13G1Q8NGZ3 307 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 RDH5Q92781 318 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 PELI1Q96FA3 418 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 DIRC2Q96SL1 478 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 PIMREGQ9BSJ6 248 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 PAPOLGQ9BWT3 736 aaKnown RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ANKRD60Q9BZ19 345 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 BPESC1Q9GZL8 116 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 PPP1R3EQ9H7J1 279 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ISG20L2Q9H9L3 353 aaKnown RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 MYOZ1Q9NP98 299 aaPredicted RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 INPP5EQ9NRR6 644 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 ZNF275Q9NSD4 429 aaPredicted RBP12.22□□□□□ -0.45
HLA-F-229ENST00000489502 TMEM100Q9NV29 134 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 DCAF16Q9NXF7 216 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 SNX5Q9Y5X3 404 aa12.22□□□□□ -0.45
HLA-F-229ENST00000489502 IGHV1-69-2A0A0G2JMI3 117 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 IRGMA1A4Y4 181 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 SLC1A7O00341 560 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 IGLV3-1P01715 115 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 DSCR9P59020 149 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 NANOS3P60323 173 aaKnown RBP12.21□□□□□ -0.45
HLA-F-229ENST00000489502 MVKQ03426 396 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 OR8G1Q15617 311 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 GGHQ92820 318 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 MRPL48Q96GC5 212 aaKnown RBP12.21□□□□□ -0.45
HLA-F-229ENST00000489502 MEGF10Q96KG7 1140 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 CNBD2Q96M20 576 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 JAM3Q9BX67 310 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 EGLN1Q9GZT9 426 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 MRPL15Q9P015 296 aaKnown RBP12.21□□□□□ -0.45
HLA-F-229ENST00000489502 PSORS1C1Q9UIG5 152 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 DIMT1Q9UNQ2 313 aaKnown RBP12.21□□□□□ -0.45
HLA-F-229ENST00000489502 RHBDD3Q9Y3P4 386 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 MTORP42345 2549 aa12.21□□□□□ -0.45
HLA-F-229ENST00000489502 ABCA2Q9BZC7 2435 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 DYSFO75923 2080 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 A0A096LNT2 108 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 LOC107986453A0A1B0GWG9 222 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 A0A1B0GWJ7 208 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 LOC390937A0A1W2PQ73 354 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 EFCAB10A6NFE3 127 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 ANKRD30BLA7E2S9 258 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 HTR1AP08908 422 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 PIPP12273 146 aaPredicted RBP12.2□□□□□ -0.46
HLA-F-229ENST00000489502 FAHP16930 419 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 MYL12AP19105 171 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 ACHEP22303 614 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 DCKP27707 260 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 ST3GAL4Q11206 333 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 C6orf141Q5SZD1 244 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 OR2G6Q5TZ20 316 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 PRAMEF6Q5VXH4 476 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 SYS1Q8N2H4 156 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 OR2G2Q8NGZ5 317 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 SGCDQ92629 289 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 COX4I2Q96KJ9 171 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 ZNF184Q99676 751 aaPredicted RBP12.2□□□□□ -0.46
HLA-F-229ENST00000489502 TMUB1Q9BVT8 246 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 REG4Q9BYZ8 158 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 CHODLQ9H9P2 273 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 DLL4Q9NR61 685 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 CLEC2DQ9UHP7 191 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 ZNF391Q9UJN7 358 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 PCDHGB5Q9Y5G0 923 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 CSPG4Q6UVK1 2322 aa12.2□□□□□ -0.46
HLA-F-229ENST00000489502 A0A1B0GTI1 187 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 VWC2LB2RUY7 222 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 E9PI62 339 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 NDUFS8O00217 210 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 TACSTD2P09758 323 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 CD99P14209 185 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 SLC25A16P16260 332 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 GNALP38405 381 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 DDOSTP39656 456 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 CRYBB2P43320 205 aa12.19□□□□□ -0.46
HLA-F-229ENST00000489502 NR4A2P43354 598 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms