RNA–Protein interactions for RNA: ENST00000488989.1

CLDN11-208, Transcript of claudin 11, humanhuman

TSL 4

Gene CLDN11, Length 600 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-208ENST00000488989 COMMD2Q86X83 199 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 OR13C3Q8NGS6 347 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 FAM222BQ8WU58 562 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 C12orf43Q96C57 262 aaKnown RBP13.77□□□□□ -0.21
CLDN11-208ENST00000488989 PLPPR2Q96GM1 343 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 RADILQ96JH8 1075 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 KCTD7Q96MP8 289 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 OR2J1Q9GZK6 312 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 OR51B6Q9H340 312 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 NOX4Q9NPH5 578 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 CRIM1Q9NZV1 1036 aa13.77□□□□□ -0.21
CLDN11-208ENST00000488989 TRAV1-2A0A0B4J238 106 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 DEFB108AA8MXU0 73 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 H3BSH0 61 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 CASKO14936 926 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 SLC22A1O15245 554 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 LMX1BO60663 402 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 NOL3O60936 208 aaKnown RBP13.76□□□□□ -0.21
CLDN11-208ENST00000488989 IGFBP3P17936 291 aaPredicted RBP13.76□□□□□ -0.21
CLDN11-208ENST00000488989 THBS4P35443 961 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 DDOSTP39656 456 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 ERVS71-1P61550 626 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 VBP1P61758 197 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 LSM3P62310 102 aaKnown RBP13.76□□□□□ -0.21
CLDN11-208ENST00000488989 SNTB2Q13425 540 aaKnown RBP13.76□□□□□ -0.21
CLDN11-208ENST00000488989 FAM27D1Q5T7N8 215 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 MBNL2Q5VZF2 373 aaKnown RBP13.76□□□□□ -0.21
CLDN11-208ENST00000488989 TMEM42Q69YG0 159 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 ZNF529Q6P280 563 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 SEMA6DQ8NFY4 1073 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 HAVCR1Q96D42 359 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 ADAT3Q96EY9 351 aaPredicted RBP13.76□□□□□ -0.21
CLDN11-208ENST00000488989 TMEM204Q9BSN7 226 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 FOXJ3Q9UPW0 622 aa13.76□□□□□ -0.21
CLDN11-208ENST00000488989 ABCA4P78363 2273 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 SHISA3A0PJX4 238 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 CCDC160A6NGH7 325 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 SHISA9B4DS77 424 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 ZNF250P15622 560 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 KITLGP21583 273 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 RPS23P62266 143 aaKnown RBP13.75□□□□□ -0.21
CLDN11-208ENST00000488989 RIPPLY1Q0D2K3 151 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 HLXQ14774 488 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-208ENST00000488989 ZNF718Q3SXZ3 478 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 HSD17B12Q53GQ0 312 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 RGS7BPQ6MZT1 257 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-208ENST00000488989 SERPINA12Q8IW75 414 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 CSNK2A3Q8NEV1 391 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 KLF14Q8TD94 323 aaPredicted RBP13.75□□□□□ -0.21
CLDN11-208ENST00000488989 TMEM171Q8WVE6 324 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 FGGYQ96C11 551 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 ZNF442Q9H7R0 627 aa13.75□□□□□ -0.21
CLDN11-208ENST00000488989 ICE1Q9Y2F5 2266 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 A0A1W2PPK0 400 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 CD300LBA8K4G0 201 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 IQCF6A8MYZ5 107 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 ALX3O95076 343 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 CD3EP07766 207 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 SELEP16581 610 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 SRMP19623 302 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 CALRP27797 417 aaKnown RBP13.74□□□□□ -0.21
CLDN11-208ENST00000488989 TGFBR1P36897 503 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 MTNR1BP49286 362 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 PSG7Q13046 419 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 DAZAP2Q15038 168 aaPredicted RBP13.74□□□□□ -0.21
CLDN11-208ENST00000488989 MSMPQ1L6U9 139 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 TMEM255AQ5JRV8 349 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 SPATA46Q5T0L3 261 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 UTS2BQ765I0 119 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 PIAS4Q8N2W9 510 aaPredicted RBP13.74□□□□□ -0.21
CLDN11-208ENST00000488989 KBTBD8Q8NFY9 601 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 OR56B2PQ8NGI1 322 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 PP6455Q8WZ26 134 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 CMBLQ96DG6 245 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 CHST5Q9GZS9 411 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 PIGLQ9Y2B2 252 aa13.74□□□□□ -0.21
CLDN11-208ENST00000488989 ROS1P08922 2347 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 IGLV3-9A0A075B6K5 115 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 TRAV8-7A0A075B6U6 113 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 ZNF816-ZNF321PA0A0X1KG74 233 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 GGT3PA6NGU5 568 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 GOSR1O95249 250 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 CST4P01036 141 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 IL1AP01583 271 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 FAHP16930 419 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 ZNF20P17024 532 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 MYL9P24844 172 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 MPV17P39210 176 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 SPCS2Q15005 226 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 SLC22A25Q6T423 547 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 USP43Q70EL4 1123 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 TPRA1Q86W33 373 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 OR5D14Q8NGL3 314 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 PIGTQ969N2 578 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 ORAI1Q96D31 301 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 SPOCK3Q9BQ16 436 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 ZCCHC4Q9H5U6 513 aa13.73□□□□□ -0.21
CLDN11-208ENST00000488989 PLEKHA1Q9HB21 404 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms