RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 TAF13Q15543 124 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 PCK2Q16822 640 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 LDLRAD3Q86YD5 345 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 SCCPDHQ8NBX0 429 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 OR8S1Q8NH09 359 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 ST8SIA4Q92187 359 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 CCT8L2Q96SF2 557 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 CENPMQ9NSP4 180 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 IL20Q9NYY1 176 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 RPUSD1Q9UJJ7 312 aaKnown RBP15.21■□□□□ 0.03
HDAC6-231ENST00000488905 N6AMT1Q9Y5N5 214 aa15.21■□□□□ 0.03
HDAC6-231ENST00000488905 ANKRD30BLA7E2S9 258 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 GPR137BO60478 399 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 GYPBP06028 91 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 FMO3P31513 532 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 DDOSTP39656 456 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 CRMP1Q14194 572 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 RASSF6Q6ZTQ3 369 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 WDR86Q86TI4 376 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 LINC00471Q8N535 108 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 MMP27Q9H306 513 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 RNF114Q9Y508 228 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 KPTNQ9Y664 436 aa15.2■□□□□ 0.02
HDAC6-231ENST00000488905 A0A1B0GW55 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 TNFRSF11BO00300 401 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 TIMM23O14925 209 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 TBX1O43435 398 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L2P0CJ85 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L3P0CJ86 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L4P0CJ87 422 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L5P0CJ88 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L6P0CJ89 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L7P0CJ90 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 SPI1P17947 270 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 GRK5P34947 590 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 IER3P46695 156 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 CX3CR1P49238 355 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 HMGA2P52926 109 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 KRTAP10-3P60369 221 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 GRB2P62993 217 aaKnown RBP15.19■□□□□ 0.02
HDAC6-231ENST00000488905 POU4F2Q12837 409 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 TIGD6Q17RP2 521 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 MICBQ29980 383 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 CDONQ4KMG0 1287 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 TEX30Q5JUR7 227 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 ZNF770Q6IQ21 691 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4L9Q6RFH8 374 aaPredicted RBP15.19■□□□□ 0.02
HDAC6-231ENST00000488905 RHOUQ7L0Q8 258 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 SLC16A9Q7RTY1 509 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 VMO1Q7Z5L0 202 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 PDZD9Q8IXQ8 264 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 FGFRL1Q8N441 504 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 ZNF511Q8NB15 262 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 OR6K6Q8NGW6 343 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 LRRC29Q8WV35 223 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 CDRT15Q96T59 188 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 NMNAT2Q9BZQ4 307 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 FAM107BQ9H098 131 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 RNPEPL1Q9HAU8 725 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 DUX4Q9UBX2 424 aa15.19■□□□□ 0.02
HDAC6-231ENST00000488905 A0A1B0GVI7 797 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 DHRS12A0PJE2 317 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 ZNF593O00488 134 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-231ENST00000488905 ANXA2P07355 339 aaKnown RBP15.18■□□□□ 0.02
HDAC6-231ENST00000488905 CLUP10909 449 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 MUC1P15941 1255 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-231ENST00000488905 SLC25A1P53007 311 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 CSNK2BP67870 215 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 FAM3AP98173 230 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 WDR38Q5JTN6 314 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 C11orf53Q8IXP5 236 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 PIP4P2Q8N4L2 257 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 OR1M1Q8NGA1 313 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 LINC01006Q8NI28 216 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 REEP6Q96HR9 211 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 TSSK6Q9BXA6 273 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 TOR3AQ9H497 397 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 CNTD2Q9H8S5 307 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 ONECUT1Q9UBC0 465 aa15.18■□□□□ 0.02
HDAC6-231ENST00000488905 hCG_38984A0A1B0GV85 526 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-231ENST00000488905 SNX3O60493 162 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 TIPRLO75663 272 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 CCNB2O95067 398 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 GASTP01350 101 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 HSD11B1P28845 292 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 MAGEA2P43356 314 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 SLC15A1P46059 708 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 ELF3P78545 371 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-231ENST00000488905 EIF2B1Q14232 305 aaKnown RBP15.17■□□□□ 0.02
HDAC6-231ENST00000488905 WDR82Q6UXN9 313 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 SLC36A1Q7Z2H8 476 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 DPY19L4Q7Z388 723 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 FAM216BQ8N7L0 139 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 AQP11Q8NBQ7 271 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 LY6G5BQ8NDX9 201 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 OR2T33Q8NG76 320 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 OR4Q3Q8NH05 313 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 LRTOMTQ8WZ04 291 aa15.17■□□□□ 0.02
HDAC6-231ENST00000488905 CCL13Q99616 98 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms