RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 ABRACLQ9P1F3 81 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 IKZF2Q9UKS7 526 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 SONP18583 2426 aaKnown RBP8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 ARFGEF3Q5TH69 2177 aa8.11□□□□□ -1.11
TMEM39A-208ENST00000486159 A0A096LPE4 126 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 TRBV5-5A0A0J9YX44 114 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 A0A1W2PPZ6 126 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF503-AS2A6NEH8 195 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 NOTOA8MTQ0 251 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 GPR171O14626 319 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 CELA3BP08861 270 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 SPARCP09486 303 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 CLEC2LP0C7M8 214 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 PGA4P0DJD7 388 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 PGA3P0DJD8 388 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 OR8G3PP0DMU2 310 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 IGHV4-31P0DP07 118 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF16P17020 682 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 RAB3BP20337 219 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 APEX1P27695 318 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 LAP3P28838 519 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 CALCRP30988 508 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 RANBP1P43487 201 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 RPS11P62280 158 aaKnown RBP eCLIP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 RIN1Q13671 783 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 EIF2B1Q14232 305 aaKnown RBP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 HIST3H3Q16695 136 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 SWI5Q1ZZU3 235 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 TRIM16LQ309B1 348 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 Q499Y3 187 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 HSD17B12Q53GQ0 312 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 SLC25A47Q6Q0C1 308 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 VHLLQ6RSH7 139 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 CREB3L2Q70SY1 520 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 RFLNBQ8N5W9 214 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 OR2G2Q8NGZ5 317 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 GPR148Q8TDV2 347 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 C10orf105Q8TEF2 133 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 ZNF837Q96EG3 531 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 ALKBH3Q96Q83 286 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 ATF6BQ99941 703 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 SOX7Q9BT81 388 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 NELFAQ9H3P2 528 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 SP140LQ9H930 580 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 FAIMQ9NVQ4 179 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 RCE1Q9Y256 329 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 COA3Q9Y2R0 106 aaPredicted RBP8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 KLHDC2Q9Y2U9 406 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 NOTCH1P46531 2555 aa8.1□□□□□ -1.11
TMEM39A-208ENST00000486159 FABP12A6NFH5 140 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 OR4C45A6NMZ5 311 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 ST8SIA5O15466 376 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 PHF1O43189 567 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 TPPPO94811 219 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 ZFPL1O95159 310 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 PTTG1O95997 202 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 MPGP29372 298 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 APOBEC3AP31941 199 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 GUCA1AP43080 201 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 EVX1P49640 407 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 SCAND1P57086 179 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 LSM6P62312 80 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 LOXL1Q08397 574 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 OXA1LQ15070 435 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 MEP1BQ16820 701 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 TBRG1Q3YBR2 411 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 CHRFAM7AQ494W8 412 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 PHYHD1Q5SRE7 291 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 C10orf128Q5T292 105 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 OR7E24Q6IFN5 339 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 SFXN4Q6P4A7 337 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 CLEC2AQ6UVW9 174 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 LYPD4Q6UWN0 246 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 BAIAP2L2Q6UXY1 529 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 DCDC5Q6ZRR9 648 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 LRRC28Q86X40 367 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 LYSMD2Q8IV50 215 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 OR1K1Q8NGR3 316 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 FAM168AQ92567 244 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 BCL2L2Q92843 193 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 TMEM54Q969K7 222 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 TMEM45BQ96B21 275 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 DIRAS2Q96HU8 199 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 TXNDC15Q96J42 360 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 MAP6Q96JE9 813 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 C4orf45Q96LM5 186 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 DERL3Q96Q80 235 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 DCLRE1CQ96SD1 692 aaKnown RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 ABHD6Q9BV23 337 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 C1orf198Q9H425 327 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 ELOVL3Q9HB03 270 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 BARX1Q9HBU1 254 aaPredicted RBP8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 ABCB9Q9NP78 766 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 MED29Q9NX70 200 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 SLCO1C1Q9NYB5 712 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 GRIP1Q9Y3R0 1128 aa8.09□□□□□ -1.11
TMEM39A-208ENST00000486159 TRBV5-7A0A0A0MS05 114 aa8.08□□□□□ -1.12
TMEM39A-208ENST00000486159 IGHV4-61A0A0C4DH41 118 aa8.08□□□□□ -1.12
TMEM39A-208ENST00000486159 ACOD1A6NK06 481 aa8.08□□□□□ -1.12
TMEM39A-208ENST00000486159 PRR32B1ATL7 298 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms