RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 SLC22A13Q9Y226 551 aa6.05□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF175Q9Y473 711 aa6.05□□□□□ -1.44
BRCA1-216ENST00000484087 FLVCR1Q9Y5Y0 555 aa6.05□□□□□ -1.44
BRCA1-216ENST00000484087 ETV7Q9Y603 341 aa6.05□□□□□ -1.44
BRCA1-216ENST00000484087 ABCA4P78363 2273 aa6.05□□□□□ -1.44
BRCA1-216ENST00000484087 A6NNC1 897 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 PIN1P1O15428 100 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 SYT7O43581 403 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 SS18L1O75177 396 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 MRPL33O75394 65 aaKnown RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 UBL3O95164 117 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 PNPP00491 289 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 SSTR2P30874 369 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 CDAP32320 146 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 THBS2P35442 1172 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 CAPZA1P52907 286 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 FOXG1P55316 489 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 PCBD1P61457 104 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 MRPS34P82930 218 aaKnown RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 MFGE8Q08431 387 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 BAK1Q16611 211 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 FBXL19-AS1Q494R0 122 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 HES5Q5TA89 166 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 HACD4Q5VWC8 232 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 FOXL2NBQ6ZUU3 175 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 FAM214BQ7L5A3 538 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 CDH24Q86UP0 819 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 WDFY1Q8IWB7 410 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 ELMOD2Q8IZ81 293 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 RDH10Q8IZV5 341 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM123Q8N131 208 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF283Q8N7M2 679 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 NKAIN3Q8N8D7 197 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 IL17RDQ8NFM7 739 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 RAB40AQ8WXH6 277 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 HTRA1Q92743 480 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 TMEM45BQ96B21 275 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 PHF21AQ96BD5 680 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 FOXRED1Q96CU9 486 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 C14orf79Q96F83 325 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 S100A16Q96FQ6 103 aaKnown RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 WFIKKN1Q96NZ8 548 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 SDHCQ99643 169 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 WACQ9BTA9 647 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 PBOV1Q9GZY1 135 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 HDHD2Q9H0R4 259 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 CLEC4MQ9H2X3 399 aaPredicted RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 LIN7BQ9HAP6 207 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 FBXL3Q9UKT7 428 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 PLEKHA6Q9Y2H5 1048 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 NOSIPQ9Y314 301 aaKnown RBP6.04□□□□□ -1.44
BRCA1-216ENST00000484087 LHFPL6Q9Y693 200 aa6.04□□□□□ -1.44
BRCA1-216ENST00000484087 RAI1Q7Z5J4 1906 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 LOC107986453A0A1B0GWG9 222 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 A0A1W2PQ09 198 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF716A6NP11 495 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CENPXA8MT69 81 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 H3BSH0 61 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 P2RY10O00398 339 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 MSTNO14793 375 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 RER1O15258 196 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 MAGEB3O15480 346 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SRSF10O75494 262 aaKnown RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CTAG2O75638 210 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 FARS2O95363 451 aaKnown RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 IL18BPO95998 194 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 PAHP00439 452 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 EIF4EP06730 217 aaKnown RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 THBDP07204 575 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ERCC1P07992 297 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CSF3P09919 207 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF20P17024 532 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 FSTP19883 344 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 NTF4P34130 210 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 MAGEB1P43366 347 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CX3CR1P49238 355 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 BCAP31P51572 246 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 PRKXP51817 358 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ART1P52961 327 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SCRN3Q0VDG4 424 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ECH1Q13011 328 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ASAH1Q13510 395 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 RNPS1Q15287 305 aaKnown RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SF3B4Q15427 424 aaKnown RBP eCLIP6.03□□□□□ -1.442e-6■■■□□ 15.1
BRCA1-216ENST00000484087 TAB1Q15750 504 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 RAB11BQ15907 218 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SAMD5Q5TGI4 173 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 FAM27BQ5VT28 67 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 C9orf135Q5VTT2 229 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ZNF57Q68EA5 555 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 OR2A2Q6IF42 318 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CCBE1Q6UXH8 406 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CFAP77Q6ZQR2 320 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SYT9Q86SS6 491 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 LRRTM1Q86UE6 522 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 CXorf67Q86X51 503 aaPredicted RBP6.03□□□□□ -1.44
BRCA1-216ENST00000484087 COMMD2Q86X83 199 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 SERPINA12Q8IW75 414 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 LRRC18Q8N456 261 aa6.03□□□□□ -1.44
BRCA1-216ENST00000484087 ZIC4Q8N9L1 334 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms