RNA–Protein interactions for RNA: ENST00000483941.1

SMAD9-204, Transcript of SMAD family member 9, humanhuman

TSL 3

Gene SMAD9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-204ENST00000483941 ZNF584Q8IVC4 421 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 RDH10Q8IZV5 341 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 ZNF295-AS1Q8N0V1 137 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 PLPP7Q8NBV4 271 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 REEP6Q96HR9 211 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 BCL2L14Q9BZR8 327 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 NOX4Q9NPH5 578 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 CCDC59Q9P031 241 aaKnown RBP12.1□□□□□ -0.47
SMAD9-204ENST00000483941 SPG11Q96JI7 2443 aa12.1□□□□□ -0.47
SMAD9-204ENST00000483941 ABCA2Q9BZC7 2435 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 MAP1AP78559 2803 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-204ENST00000483941 TRBV5-7A0A0A0MS05 114 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 CDRT1O95170 752 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 IGLV3-1P01715 115 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 CRYAAP02489 173 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 SDC2P34741 201 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 SOX2P48431 317 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 ADORA2A-AS1P86434 159 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 RIPPLY1Q0D2K3 151 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 SPCS2Q15005 226 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 TAB1Q15750 504 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 TMEM108Q6UXF1 575 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 Q6ZSR3 168 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 SEMA6DQ8NFY4 1073 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 NDNFQ8TB73 568 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 PP6455Q8WZ26 134 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 RGP1Q92546 391 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-204ENST00000483941 SPSB4Q96A44 273 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 SGK3Q96BR1 496 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 CPNE2Q96FN4 548 aaPredicted RBP12.09□□□□□ -0.47
SMAD9-204ENST00000483941 TECTBQ96PL2 329 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 MRI1Q9BV20 369 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 NOX3Q9HBY0 568 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 A3GALT2U3KPV4 340 aa12.09□□□□□ -0.47
SMAD9-204ENST00000483941 A0A1B0GTI1 187 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 A0A1W2PPW3 197 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 A0A1W2PR80 420 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 MAGEB3O15480 346 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 OCMP0CE72 109 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-204ENST00000483941 SELEP16581 610 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 FSTP19883 344 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 RAB3BP20337 219 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 PTAFRP25105 342 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 THBS4P35443 961 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 KRTAP10-9P60411 292 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 RPS23P62266 143 aaKnown RBP12.08□□□□□ -0.48
SMAD9-204ENST00000483941 GFOD2Q3B7J2 385 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 SNAI3Q3KNW1 292 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 LINC00299Q6ZSB3 139 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 NCCRP1Q6ZVX7 275 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-204ENST00000483941 MRPL21Q7Z2W9 205 aaKnown RBP12.08□□□□□ -0.48
SMAD9-204ENST00000483941 NAA40Q86UY6 237 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 CSNK2A3Q8NEV1 391 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 DYNC2LI1Q8TCX1 351 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 PPP1R14AQ96A00 147 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 SLC25A46Q96AG3 418 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 FOXRED1Q96CU9 486 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-204ENST00000483941 FAM71F1Q96KD3 344 aaPredicted RBP12.08□□□□□ -0.48
SMAD9-204ENST00000483941 V9GYS6 101 aa12.08□□□□□ -0.48
SMAD9-204ENST00000483941 FAM90A27PA6NNH2 459 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 VSTM5A8MXK1 200 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 ALX3O95076 343 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 CECR9P0C854 216 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 EPXP11678 715 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF35P13682 527 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF182P17025 639 aaPredicted RBP12.07□□□□□ -0.48
SMAD9-204ENST00000483941 CAPZA1P52907 286 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 UCP2P55851 309 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 DYNC1I2Q13409 638 aaKnown RBP12.07□□□□□ -0.48
SMAD9-204ENST00000483941 GLYATL3Q5SZD4 288 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 GLT8D1Q68CQ7 371 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 SEZ6L2Q6UXD5 910 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 NKAIN3Q8N8D7 197 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 OR13C5Q8NGS8 318 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 OR14K1Q8NGZ2 314 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 FGGYQ96C11 551 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 KCTD12Q96CX2 325 aaKnown RBP12.07□□□□□ -0.48
SMAD9-204ENST00000483941 TRMT61AQ96FX7 289 aaKnown RBP12.07□□□□□ -0.48
SMAD9-204ENST00000483941 MS4A3Q96HJ5 214 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 DCUN1D5Q9BTE7 237 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 REPIN1Q9BWE0 567 aaKnown RBP12.07□□□□□ -0.48
SMAD9-204ENST00000483941 ABCB9Q9NP78 766 aa12.07□□□□□ -0.48
SMAD9-204ENST00000483941 IGHV1-18A0A0C4DH31 117 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 A0A1W2PPK0 400 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ANXA2P2A6NMY6 339 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 NOTOA8MTQ0 251 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 M0R1B8 84 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 CLDN14O95500 239 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 CCL2P13500 99 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 RAB3AP20336 220 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 RPS19P39019 145 aaKnown RBP12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF83P51522 516 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 OR8B8Q15620 311 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ZNF404Q494X3 552 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 MZT2AQ6P582 158 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 UTS2BQ765I0 119 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 CDH26Q8IXH8 852 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 OR51A4Q8NGJ6 313 aa12.06□□□□□ -0.48
SMAD9-204ENST00000483941 ACOT12Q8WYK0 555 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms