RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 GPR50Q13585 617 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 NKPD1Q17RQ9 610 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 MBNL2Q5VZF2 373 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 PAMR1Q6UXH9 720 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 PGAP1Q75T13 922 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 ELMOD2Q8IZ81 293 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 RDH10Q8IZV5 341 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 BHLHE23Q8NDY6 225 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 RGP1Q92546 391 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 REEP6Q96HR9 211 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 FUNDC2Q9BWH2 189 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 TAAR3PQ9P1P4 343 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 ITPR2Q14571 2701 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 LOC107986453A0A1B0GWG9 222 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 ACOD1A6NK06 481 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 CD8AP01732 235 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 TUBG1P23258 451 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 ALDH3B1P43353 468 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 PSG7Q13046 419 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 EFNB3Q15768 340 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 MST1LQ2TV78 715 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 TMEM255AQ5JRV8 349 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR2T2Q6IF00 324 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 CLVS1Q8IUQ0 354 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR5AS1Q8N127 324 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR51E1Q8TCB6 317 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 SGK3Q96BR1 496 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 TRAF4Q9BUZ4 470 aaPredicted RBP17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 DYNLRB1Q9NP97 96 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 TUBG2Q9NRH3 451 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 ZNF281Q9Y2X9 895 aa17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 SF3B6Q9Y3B4 125 aaKnown RBP17.06■□□□□ 0.32
TRAPPC12-220ENST00000482645 H3BSA7 217 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 CD1AP06126 327 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 CDKN1AP38936 164 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 FBXW12Q6X9E4 464 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 DTX2Q86UW9 622 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR10AC1Q8NH08 325 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 TSEN15Q8WW01 171 aaKnown RBP17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 NAA50Q9GZZ1 169 aaKnown RBP17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR51E2Q9H255 320 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 EXOSC4Q9NPD3 245 aaKnown RBP17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 STUB1Q9UNE7 303 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 CSMD1Q96PZ7 3565 aa17.05■□□□□ 0.32
TRAPPC12-220ENST00000482645 IGLV3-9A0A075B6K5 115 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 LOC100506127A0A0U1RQW1 187 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 DPPA5A6NC42 116 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 CCDC160A6NGH7 325 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 GGT3PA6NGU5 568 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 RGS9O75916 674 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 RAF1P04049 648 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 RAC2P15153 192 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 CD53P19397 219 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 ACHEP22303 614 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 FABP5Q01469 135 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 SWI5Q1ZZU3 235 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 YIF1BQ5BJH7 314 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR51A4Q8NGJ6 313 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 RPL3LQ92901 407 aaKnown RBP17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 HAVCR1Q96D42 359 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 FAM71F1Q96KD3 344 aaPredicted RBP17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 CHCHD6Q9BRQ6 235 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 CACNG6Q9BXT2 260 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 GPR84Q9NQS5 396 aa17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 PURGQ9UJV8 347 aaKnown RBP17.04■□□□□ 0.32
TRAPPC12-220ENST00000482645 A0A1B0GVI7 797 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 M0R233 179 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 IGHV3-13P01766 116 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 NAT2P11245 290 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 BMP4P12644 408 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 PSMA1P25786 263 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 INSL4Q14641 139 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 TRAM1Q15629 374 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 TMEM244Q5VVB8 128 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 C11orf71Q6IPW1 123 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 ZCCHC24Q8N2G6 241 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 GTF3AQ92664 365 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 LYZL4Q96KX0 146 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 VRK1Q99986 396 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 SOX7Q9BT81 388 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 REPIN1Q9BWE0 567 aaKnown RBP17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 EDARQ9UNE0 448 aa17.03■□□□□ 0.32
TRAPPC12-220ENST00000482645 ANKRD17O75179 2603 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 A0A0U1RQV5 110 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 PLSCR5A0PG75 271 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 SYT7O43581 403 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 AIREO43918 545 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 NOL3O60936 208 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 ISG15P05161 165 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 DNASE1P24855 282 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 SOX2P48431 317 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 EVX1P49640 407 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 RPS11P62280 158 aaKnown RBP eCLIP17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 TIMM50Q3ZCQ8 353 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 SLC16A12Q6ZSM3 486 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 MS4A15Q8N5U1 240 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 GPR148Q8TDV2 347 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 TRMT61AQ96FX7 289 aaKnown RBP17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 OR14A2Q96R54 314 aa17.02■□□□□ 0.32
TRAPPC12-220ENST00000482645 TPK1Q9H3S4 243 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms