RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 CHST5Q9GZS9 411 aa8.77□□□□□ -1.01
USP39-215ENST00000481409 ZCCHC4Q9H5U6 513 aa8.77□□□□□ -1.01
USP39-215ENST00000481409 TMEM138Q9NPI0 162 aa8.77□□□□□ -1.01
USP39-215ENST00000481409 CGGBP1Q9UFW8 167 aaPredicted RBP8.77□□□□□ -1.01
USP39-215ENST00000481409 STARD10Q9Y365 291 aa8.77□□□□□ -1.01
USP39-215ENST00000481409 NKX2-6A6NCS4 301 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 NOTOA8MTQ0 251 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 PIN1P1O15428 100 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 MAGEB3O15480 346 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 SULT1B1O43704 296 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 ZG16O60844 167 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CDRT1O95170 752 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CST4P01036 141 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 PRB1P04280 392 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 THBDP07204 575 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CELA3BP08861 270 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CCL2P13500 99 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 RAB3AP20336 220 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 KITLGP21583 273 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 PRKACBP22694 351 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 GCH1P30793 250 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 SDC2P34741 201 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 SOX2P48431 317 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 SELENOVP59797 346 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 LSM3P62310 102 aaKnown RBP8.76□□□□□ -1.01
USP39-215ENST00000481409 ZNF92Q03936 586 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 SPCS2Q15005 226 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CNN3Q15417 329 aaKnown RBP8.76□□□□□ -1.01
USP39-215ENST00000481409 ODF4Q2M2E3 257 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CNPY1Q3B7I2 92 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 CLVS2Q5SYC1 327 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 NCMAPQ5T1S8 102 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 GLT8D1Q68CQ7 371 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 TMEM42Q69YG0 159 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 ZNF101Q8IZC7 436 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 DNAAF1Q8NEP3 725 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 OR51A4Q8NGJ6 313 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 OR1J1Q8NGS3 322 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 OR13C5Q8NGS8 318 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 FAM222BQ8WU58 562 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 SPSB1Q96BD6 273 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 FGGYQ96C11 551 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 HAVCR1Q96D42 359 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 MARS2Q96GW9 593 aaKnown RBP8.76□□□□□ -1.01
USP39-215ENST00000481409 FAM71F1Q96KD3 344 aaPredicted RBP8.76□□□□□ -1.01
USP39-215ENST00000481409 ZNF442Q9H7R0 627 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 NPAP1Q9NZP6 1156 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 MRPL15Q9P015 296 aaKnown RBP8.76□□□□□ -1.01
USP39-215ENST00000481409 KCNN3Q9UGI6 736 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 FBXO9Q9UK97 447 aaPredicted RBP8.76□□□□□ -1.01
USP39-215ENST00000481409 PIGLQ9Y2B2 252 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 N6AMT1Q9Y5N5 214 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 MPC1Q9Y5U8 109 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 IGSF10Q6WRI0 2623 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 NBEAQ8NFP9 2946 aa8.76□□□□□ -1.01
USP39-215ENST00000481409 HCFC1P51610 2035 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 A0A075B6Q4 140 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 GGT3PA6NGU5 568 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 ANKRD30BLA7E2S9 258 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 IQCF6A8MYZ5 107 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 NGFP01138 241 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 ZNF250P15622 560 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 ZNF182P17025 639 aaPredicted RBP8.75□□□□□ -1.01
USP39-215ENST00000481409 BDKRB2P30411 391 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 RPS19P39019 145 aaKnown RBP8.75□□□□□ -1.01
USP39-215ENST00000481409 EVX1P49640 407 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 NKX6-1P78426 367 aaPredicted RBP8.75□□□□□ -1.01
USP39-215ENST00000481409 MZT1Q08AG7 82 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 GFOD2Q3B7J2 385 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 RGS7BPQ6MZT1 257 aaPredicted RBP8.75□□□□□ -1.01
USP39-215ENST00000481409 RFPL4BQ6ZWI9 263 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 MYPOPQ86VE0 399 aaPredicted RBP8.75□□□□□ -1.01
USP39-215ENST00000481409 WFDC8Q8IUA0 241 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 PAQR4Q8N4S7 273 aaPredicted RBP8.75□□□□□ -1.01
USP39-215ENST00000481409 SPERTQ8NA61 448 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 OR10AC1Q8NH08 325 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 NDNFQ8TB73 568 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 CMTM3Q96MX0 182 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 UQCC2Q9BRT2 126 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 C1QTNF6Q9BXI9 259 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 MMP27Q9H306 513 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 CYSLTR2Q9NS75 346 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 GPR160Q9UJ42 338 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 V9GY05 133 aa8.75□□□□□ -1.01
USP39-215ENST00000481409 A0A1W2PPW3 197 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 ANXA2P2A6NMY6 339 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 CD300LBA8K4G0 201 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 GMDSO60547 372 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 NRASP01111 189 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 CD3EP07766 207 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 OCMP0CE72 109 aaPredicted RBP8.74□□□□□ -1.01
USP39-215ENST00000481409 PRF1P14222 555 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 IGFBP2P18065 325 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 ATF1P18846 271 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 CALCRP30988 508 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 RIN1Q13671 783 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 INSL4Q14641 139 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 ZNF404Q494X3 552 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 MZT2AQ6P582 158 aa8.74□□□□□ -1.01
USP39-215ENST00000481409 LRRTM1Q86UE6 522 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms