RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 POLR1DQ9Y2S0 133 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 ZNF729A6NN14 1252 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 TRAF3IP2O43734 574 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 CYB5AP00167 134 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 NR2C1P13056 603 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 HABP2Q14520 560 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 CSRP2Q16527 193 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 SLC22A24Q8N4F4 322 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 C2CD4CQ8TF44 421 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 TMEM41AQ96HV5 264 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 EGLN1Q9GZT9 426 aa16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 GDF2Q9UK05 429 aaPredicted RBP16.97■□□□□ 0.31
TNFRSF8-204ENST00000479933 MEIS3P1A6NDR6 274 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 BPNT1O95861 308 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 ITGB2P05107 769 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 GNALP38405 381 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 EIF1AXP47813 144 aaKnown RBP16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 SLC35A1P78382 337 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 PCOLCEQ15113 449 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 KCNMB1Q16558 191 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 SLC25A47Q6Q0C1 308 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 OR8S1Q8NH09 359 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 SLC39A7Q92504 469 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 EDAQ92838 391 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 MYOZ1Q9NP98 299 aaPredicted RBP16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 RHBDD3Q9Y3P4 386 aa16.96■□□□□ 0.31
TNFRSF8-204ENST00000479933 TLX3O43711 291 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 LMX1BO60663 402 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 KLK3P07288 261 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF43P17038 809 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 TRA2AQ13595 282 aaKnown RBP eCLIP16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 EXT1Q16394 746 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 CDNFQ49AH0 187 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 OPN5Q6U736 354 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR2W3Q7Z3T1 314 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 WDSUB1Q8N9V3 476 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR10S1Q8NGN2 331 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 FAM46BQ96A09 425 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 SEC61A2Q9H9S3 476 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 METTL1Q9UBP6 276 aaKnown RBP16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 LHFPL6Q9Y693 200 aa16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 CHCHD2Q9Y6H1 151 aaPredicted RBP16.96■□□□□ 0.3
TNFRSF8-204ENST00000479933 AQP7P3A6NL99 342 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF726A6NNF4 738 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 BCL2L11O43521 198 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR2F2O95006 317 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 CD74P04233 296 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 DUSP3P51452 185 aaPredicted RBP16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 SNRPEP62304 92 aaKnown RBP16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 CXADRP78310 365 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR2F1Q13607 317 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 MEF2DQ14814 521 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 TAF13Q15543 124 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR4D6Q8NGJ1 314 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR52B4Q8NGK2 314 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 SEC11CQ9BY50 192 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 TMEM185BQ9H7F4 350 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 FBLN5Q9UBX5 448 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 PCDHB10Q9UN67 800 aa16.95■□□□□ 0.3
TNFRSF8-204ENST00000479933 LOC101059948A0A1B0GTJ6 334 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 A0A1W2PNR3 127 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF736B4DX44 427 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 GOSR2O14653 212 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 PMS2P2O95744 297 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 ABOP16442 354 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 GSK3AP49840 483 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 CLDN6P56747 220 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 PDZK1IP1Q13113 114 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 C2orf68Q2NKX9 166 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 JMJD6Q6NYC1 403 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF529Q6P280 563 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 RBMS3Q6XE24 437 aaKnown RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 DVL3Q92997 716 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 NKX3-1Q99801 234 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 NUDT16L1Q9BRJ7 211 aaKnown RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF700Q9H0M5 742 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 CNTD2Q9H8S5 307 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 KANTRA0A1W2PQU2 76 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF20P17024 532 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 GABREP78334 506 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 HIST3H3Q16695 136 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 TMEM176BQ3YBM2 270 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 C4orf46Q504U0 113 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 DCAF12L2Q5VW00 463 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 ZNF584Q8IVC4 421 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 MUC20Q8N307 709 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 GTPBP8Q8N3Z3 284 aaPredicted RBP16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 AGBL5Q8NDL9 886 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR1J2Q8NGS2 313 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 TNFAIP8L1Q8WVP5 186 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 AQP3Q92482 292 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 FSCN3Q9NQT6 498 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 SLC5A6Q9Y289 635 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 DMRT1Q9Y5R6 373 aa16.94■□□□□ 0.3
TNFRSF8-204ENST00000479933 PRUNE2Q8WUY3 3088 aa16.93■□□□□ 0.3
TNFRSF8-204ENST00000479933 IGHV1-45A0A0A0MS14 117 aa16.93■□□□□ 0.3
TNFRSF8-204ENST00000479933 TRAV14DV4A0A0A6YYC5 116 aa16.93■□□□□ 0.3
TNFRSF8-204ENST00000479933 OR14I1A6ND48 311 aa16.93■□□□□ 0.3
TNFRSF8-204ENST00000479933 C9J4A7 227 aa16.93■□□□□ 0.3
TNFRSF8-204ENST00000479933 SULT2B1O00204 365 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms