RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 GDPGP1Q6ZNW5 385 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 DPY19L4Q7Z388 723 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 LDLRAD3Q86YD5 345 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 OR9Q2Q8NGE9 314 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 RBM4BQ9BQ04 359 aaKnown RBP10.94□□□□□ -0.66
VCL-205ENST00000478896 CNTD2Q9H8S5 307 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 TCF7L1Q9HCS4 588 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 RPUSD1Q9UJJ7 312 aaKnown RBP10.94□□□□□ -0.66
VCL-205ENST00000478896 KPTNQ9Y664 436 aa10.94□□□□□ -0.66
VCL-205ENST00000478896 A0A0G2JK05 382 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 ARPC2O15144 300 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 GYPBP06028 91 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 FBP1P09467 338 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 FMO3P31513 532 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 DDOSTP39656 456 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 SLC15A1P46059 708 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 IER3P46695 156 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 CX3CR1P49238 355 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 GRB2P62993 217 aaKnown RBP10.93□□□□□ -0.66
VCL-205ENST00000478896 TAF9Q16594 264 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 GFOD2Q3B7J2 385 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 C11orf91Q3C1V1 193 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 DHRS7BQ6IAN0 325 aaPredicted RBP10.93□□□□□ -0.66
VCL-205ENST00000478896 SLC36A1Q7Z2H8 476 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 CMTM4Q8IZR5 234 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 SLC37A3Q8NCC5 494 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 OR6K6Q8NGW6 343 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 LINC01006Q8NI28 216 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 ZNRF4Q8WWF5 429 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 CCL13Q99616 98 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 ELAC2Q9BQ52 826 aaKnown RBP10.93□□□□□ -0.66
VCL-205ENST00000478896 IL1RAPQ9NPH3 570 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 SIRT7Q9NRC8 400 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 KAAG1Q9UBP8 84 aa10.93□□□□□ -0.66
VCL-205ENST00000478896 A0A1B0GW55 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 TNFRSF11BO00300 401 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 ZNF593O00488 134 aaPredicted RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 TIPRLO75663 272 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 CLPXO76031 633 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 LHBP01229 141 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L2P0CJ85 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L3P0CJ86 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L4P0CJ87 422 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L5P0CJ88 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L6P0CJ89 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L7P0CJ90 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 HSD17B1P14061 328 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 MUC1P15941 1255 aaPredicted RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 EEF1B2P24534 225 aaKnown RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 MSX2P35548 267 aaPredicted RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 GNALP38405 381 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 KRTAP10-3P60369 221 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 CSNK2BP67870 215 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 GUCA2AQ02747 115 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 IKZF1Q13422 519 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 EIF2B1Q14232 305 aaKnown RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 WDR38Q5JTN6 314 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 SAMD4BQ5PRF9 694 aaKnown RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 ASPHD2Q6ICH7 369 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4L9Q6RFH8 374 aaPredicted RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 RHOUQ7L0Q8 258 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 SLC16A9Q7RTY1 509 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 FGFRL1Q8N441 504 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 FAM216BQ8N7L0 139 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 ZNF511Q8NB15 262 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 OR1M1Q8NGA1 313 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 REEP6Q96HR9 211 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 PKP2Q99959 881 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 BTBD10Q9BSF8 475 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 PAPOLGQ9BWT3 736 aaKnown RBP10.92□□□□□ -0.66
VCL-205ENST00000478896 FAM107BQ9H098 131 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 MYLK2Q9H1R3 596 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 SEMA6AQ9H2E6 1030 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 RNPEPL1Q9HAU8 725 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DNAJC27Q9NZQ0 273 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DNAJB11Q9UBS4 358 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 DUX4Q9UBX2 424 aa10.92□□□□□ -0.66
VCL-205ENST00000478896 NKX6-3A6NJ46 265 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 SLC22A31A6NKX4 558 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 ANXA2P2A6NMY6 339 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 NDUFB3O43676 98 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 FCN3O75636 299 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 KRT36O76013 467 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 CCNB2O95067 398 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 PAHP00439 452 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 NAA10P41227 235 aaPredicted RBP10.91□□□□□ -0.66
VCL-205ENST00000478896 PROK1P58294 105 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 GMFBP60983 142 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 FAM3AP98173 230 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 CRMP1Q14194 572 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 LRRC10Q5BKY1 277 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 WDR82Q6UXN9 313 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 WDR86Q86TI4 376 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 PGAM4Q8N0Y7 254 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 FTMTQ8N4E7 242 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 PIP4P2Q8N4L2 257 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 LINC00471Q8N535 108 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 OR8D4Q8NGM9 314 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 OR6N2Q8NGY6 317 aa10.91□□□□□ -0.66
VCL-205ENST00000478896 H1FXQ92522 213 aaKnown RBP10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms