RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 PILRAQ9UKJ1 303 aa12.72□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF816-ZNF321PA0A0X1KG74 233 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 A0A1W2PQD3 144 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 TMEM127O75204 238 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 GIPP09681 153 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-208ENST00000478423 AGFG1P52594 562 aaKnown RBP12.71□□□□□ -0.37
NPHP4-208ENST00000478423 ZNF766Q5HY98 468 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 SPATA46Q5T0L3 261 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 ZDHHC23Q8IYP9 409 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 NPEPL1Q8NDH3 523 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 SARGQ9BW04 601 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 HAO2Q9NYQ3 351 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 GHRLQ9UBU3 117 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 FOXJ3Q9UPW0 622 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 SULT1C2O00338 296 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 WNT1P04628 370 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 NME2P22392 152 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 MNX1P50219 401 aaPredicted RBP12.71□□□□□ -0.37
NPHP4-208ENST00000478423 BAMBIQ13145 260 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 SKP2Q13309 424 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 PLEKHF2Q9H8W4 249 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 PRELID3BQ9Y3B1 194 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 DOCK6Q96HP0 2047 aa12.71□□□□□ -0.37
NPHP4-208ENST00000478423 HSD17B6O14756 317 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 SCGB2A1O75556 95 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 RPS23P62266 143 aaKnown RBP12.71□□□□□ -0.38
NPHP4-208ENST00000478423 MC2RQ01718 297 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 DRAM2Q6UX65 266 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 DGAT2L6Q6ZPD8 337 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 ADGRG3Q86Y34 549 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 MFSD4AQ8N468 514 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 RBMXL1Q96E39 390 aaKnown RBP12.71□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF416Q9BWM5 594 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 ICAM5Q9UMF0 924 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 FLVCR1Q9Y5Y0 555 aa12.71□□□□□ -0.38
NPHP4-208ENST00000478423 SIRPB1O00241 398 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 CTXN2P0C2S0 81 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF32P17041 273 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 PTAFRP25105 342 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 PMS2CLQ68D20 193 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 C9orf40Q8IXQ3 194 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 GALNT16Q8N428 558 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 CT55Q8WUE5 264 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 WDFY2Q96P53 400 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 LRRC30A6NM36 301 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 B8ZZF3 427 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 GCM2O75603 506 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 RAB5BP61020 215 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 GAB4Q2WGN9 574 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF718Q3SXZ3 478 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 LINC00303Q3SY05 128 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ARHGEF39Q8N4T4 335 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 APOBEC3DQ96AK3 386 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 RPS10P5Q9NQ39 176 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 TMEM100Q9NV29 134 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 MEIKINA0A087WXM9 373 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 SPRY1O43609 319 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 IFNA10P01566 189 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 SELEP16581 610 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 NDUFB7P17568 137 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 FOXC1Q12948 553 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 SPINK14Q6IE38 97 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 FBXL14Q8N1E6 418 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 FAM109AQ8N4B1 249 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 OR51A4Q8NGJ6 313 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 OR2AE1Q8NHA4 323 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 FAM213BQ8TBF2 198 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF501Q96CX3 271 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 GSX2Q9BZM3 304 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 EGLN1Q9GZT9 426 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 TRAPPC4Q9Y296 219 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ST8SIA3O43173 380 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 PATE4P0C8F1 98 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF85Q03923 595 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 PEA15Q15121 130 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 PRSS53Q2L4Q9 553 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 MESTQ5EB52 335 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 ZNF468Q5VIY5 522 aaPredicted RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 OR4S1Q8NGB4 309 aa12.7□□□□□ -0.38
NPHP4-208ENST00000478423 MRM2Q9UI43 246 aaKnown RBP12.7□□□□□ -0.38
NPHP4-208ENST00000478423 NXPH3O95157 252 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 OR4E1P0C645 316 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 SPNP16150 400 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 TBPP20226 339 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 DUSP1P28562 367 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 FCGR2CP31995 323 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 THBS4P35443 961 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 GZMKP49863 264 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 MEOX1P50221 254 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 PPT1P50897 306 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 HBG1P69891 147 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 HBG2P69892 147 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 OR2AK2Q8NG84 335 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 SLC23A1Q9UHI7 598 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 TOR1AO14656 332 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 OIP5O43482 229 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 GLRA1P23415 457 aa12.69□□□□□ -0.38
NPHP4-208ENST00000478423 ACAA2P42765 397 aaKnown RBP12.69□□□□□ -0.38
NPHP4-208ENST00000478423 RAC3P60763 192 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms