RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 SPSB4Q96A44 273 aa12.32□□□□□ -0.44
NELFCD-205ENST00000477741 REPIN1Q9BWE0 567 aaKnown RBP12.32□□□□□ -0.44
NELFCD-205ENST00000477741 C6orf62Q9GZU0 229 aaPredicted RBP12.32□□□□□ -0.44
NELFCD-205ENST00000477741 TBCCD1Q9NVR7 557 aa12.32□□□□□ -0.44
NELFCD-205ENST00000477741 DAPK2Q9UIK4 370 aa12.32□□□□□ -0.44
NELFCD-205ENST00000477741 ROS1P08922 2347 aa12.32□□□□□ -0.44
NELFCD-205ENST00000477741 CTDSP2O14595 271 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 PAHP00439 452 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 ZNF20P17024 532 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 ATF1P18846 271 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 RORCP51449 518 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 TFF3Q07654 80 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 UBE2V2Q15819 145 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 IDNKQ5T6J7 187 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 HES5Q5TA89 166 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 SFXN4Q6P4A7 337 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 SERPINA12Q8IW75 414 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 SEMA6DQ8NFY4 1073 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 OR56B2PQ8NGI1 322 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 OR1J1Q8NGS3 322 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 MCFD2Q8NI22 146 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 SLC25A40Q8TBP6 338 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 ZFAND2BQ8WV99 257 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 ITLN2Q8WWU7 325 aaPredicted RBP12.31□□□□□ -0.44
NELFCD-205ENST00000477741 PHYHIPQ92561 330 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 DVL3Q92997 716 aaPredicted RBP12.31□□□□□ -0.44
NELFCD-205ENST00000477741 CCDC59Q9P031 241 aaKnown RBP12.31□□□□□ -0.44
NELFCD-205ENST00000477741 CGGBP1Q9UFW8 167 aaPredicted RBP12.31□□□□□ -0.44
NELFCD-205ENST00000477741 MYO18BQ8IUG5 2567 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 XRCC2O43543 280 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 RNF224P0DH78 156 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 MPV17P39210 176 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 PPP1CBP62140 327 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 OR8B8Q15620 311 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 ZNF404Q494X3 552 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 OR2T2Q6IF00 324 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 Q6ZSR3 168 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 PGAP1Q75T13 922 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 OR52N4Q8NGI2 321 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 TBC1D15Q8TC07 691 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 GPR173Q9NS66 373 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 RHBDD3Q9Y3P4 386 aa12.31□□□□□ -0.44
NELFCD-205ENST00000477741 DPRXA6NFQ7 191 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 ATP6V1G2-DDX39BF2Z307 99 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 CLPXO76031 633 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 FSTP19883 344 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 THBS2P35442 1172 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 DDOSTP39656 456 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 MADCAM1Q13477 382 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 FBXL19-AS1Q494R0 122 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 MRPL21Q7Z2W9 205 aaKnown RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 OR5AS1Q8N127 324 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 FAM169BQ8N8A8 192 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 RNASE6Q93091 150 aaKnown RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 DACH2Q96NX9 599 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 KCNK15Q9H427 330 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 SP140LQ9H930 580 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 KCNJ16Q9NPI9 418 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 EIF3KQ9UBQ5 218 aaKnown RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 USP9XQ93008 2570 aaPredicted RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 MTRF1O75570 445 aaKnown RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 CD40P25942 277 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 MALLQ13021 153 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 ZNF529Q6P280 563 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 TPRA1Q86W33 373 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 PIAS4Q8N2W9 510 aaPredicted RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 OR1M1Q8NGA1 313 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 AKAP1Q92667 903 aaKnown RBP eCLIP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 CMBLQ96DG6 245 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 NXF2Q9GZY0 626 aaKnown RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 RGCCQ9H4X1 137 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 NPDC1Q9NQX5 325 aaPredicted RBP12.3□□□□□ -0.44
NELFCD-205ENST00000477741 FOXJ3Q9UPW0 622 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 V9GY05 133 aa12.3□□□□□ -0.44
NELFCD-205ENST00000477741 SPTAN1Q13813 2472 aaKnown RBP12.29□□□□□ -0.44
NELFCD-205ENST00000477741 ANKHD1Q8IWZ3 2542 aaKnown RBP12.29□□□□□ -0.44
NELFCD-205ENST00000477741 LOC390937A0A1W2PQ73 354 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 ANXA2P2A6NMY6 339 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 ICMTO60725 284 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 SNRPBP14678 240 aaKnown RBP12.29□□□□□ -0.44
NELFCD-205ENST00000477741 SOX6P35712 828 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 RIPPLY1Q0D2K3 151 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 CRIP3Q6Q6R5 217 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 VHLLQ6RSH7 139 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 OR5D14Q8NGL3 314 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 TRMT10AQ8TBZ6 339 aaKnown RBP12.29□□□□□ -0.44
NELFCD-205ENST00000477741 KLF14Q8TD94 323 aaPredicted RBP12.29□□□□□ -0.44
NELFCD-205ENST00000477741 PIGTQ969N2 578 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 RADILQ96JH8 1075 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 ZCCHC4Q9H5U6 513 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 COMMD3Q9UBI1 195 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 CKLFQ9UBR5 152 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 GPR160Q9UJ42 338 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 FAM208BQ5VWN6 2430 aa12.29□□□□□ -0.44
NELFCD-205ENST00000477741 HEATR1Q9H583 2144 aaKnown RBP12.28□□□□□ -0.44
NELFCD-205ENST00000477741 GGT3PA6NGU5 568 aa12.28□□□□□ -0.44
NELFCD-205ENST00000477741 IFITM5A6NNB3 132 aa12.28□□□□□ -0.44
NELFCD-205ENST00000477741 NOTOA8MTQ0 251 aa12.28□□□□□ -0.44
NELFCD-205ENST00000477741 GMDSO60547 372 aa12.28□□□□□ -0.44
NELFCD-205ENST00000477741 MAP2K3P46734 347 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms