RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 GGT3PA6NGU5 568 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 LYNX1G3V0Z9 82 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 J3QRE1 110 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 MLNRO43193 412 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 SULT1C4O75897 302 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 CCDC159P0C7I6 412 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 LYNX1P0DP58 116 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 PIPP12273 146 aaPredicted RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 THBS2P35442 1172 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 NAA10P41227 235 aaPredicted RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 CDH15P55291 814 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 FAM3AP98173 230 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 RAB40BQ12829 278 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 TIGD6Q17RP2 521 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 ZNF829Q3KNS6 432 aaPredicted RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 KLHL22Q53GT1 634 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 C6orf141Q5SZD1 244 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 ZBTB37Q5TC79 503 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 FAM166AQ6J272 317 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 C1orf87Q8N0U7 546 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 MUC20Q8N307 709 aaPredicted RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 TEX29Q8N6K0 151 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 MAPK1IP1LQ8NDC0 245 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 CCL17Q92583 94 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 GTF3AQ92664 365 aaKnown RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 SGK3Q96BR1 496 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 MSI2Q96DH6 328 aaKnown RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 JAM3Q9BX67 310 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 CNOT2Q9NZN8 540 aaKnown RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 AASSQ9UDR5 926 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 NUFIP1Q9UHK0 495 aaKnown RBP10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 WIPI2Q9Y4P8 454 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 LRP12Q9Y561 859 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 NPTNQ9Y639 398 aa10.45□□□□□ -0.74
CLCNKA-205ENST00000477360 PPIAL4EA0A075B759 164 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 PPIAL4CA0A0B4J2A2 164 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 hCG_38984A0A1B0GV85 526 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 IRGMA1A4Y4 181 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 DHRS7CA6NNS2 312 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 ANKRD30BLA7E2S9 258 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 ZNF670-ZNF695F2Z2N8 137 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 PPIAL4DF5H284 164 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 CDC14BO60729 498 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 CRLF1O75462 422 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 IGLV3-1P01715 115 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 IGHA1P01876 353 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 ANXA2P07355 339 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 PPIAL4FP0DN26 164 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 RIDAP52758 137 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 DVL1P1P54792 670 aaPredicted RBP10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 LMO4P61968 165 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 ACTC1P68032 377 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 ACTA1P68133 377 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 ZNF322Q6U7Q0 402 aaPredicted RBP10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 LRRN1Q6UXK5 716 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 FAM57BQ71RH2 274 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 KCTD20Q7Z5Y7 419 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 SLC35F2Q8IXU6 374 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 SPICQ8N5J4 248 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 CCDC54Q8NEL0 328 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 OR51G2Q8NGK0 314 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 CLDND2Q8NHS1 167 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 LGALS12Q96DT0 336 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 REEP6Q96HR9 211 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 PGAM5Q96HS1 289 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 FGF20Q9NP95 211 aaPredicted RBP10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 TRIM36Q9NQ86 728 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 FKBP14Q9NWM8 211 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 C14orf119Q9NWQ9 140 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 KLHDC2Q9Y2U9 406 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 MPC1Q9Y5U8 109 aa10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 SONP18583 2426 aaKnown RBP10.44□□□□□ -0.74
CLCNKA-205ENST00000477360 TRAV20A0A0B4J274 112 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 LOC100289279A0A1B0GTE1 492 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 TMEM269A0A1B0GVZ9 245 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 EFCAB10A6NFE3 127 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 TMEM178BH3BS89 294 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 SLC1A7O00341 560 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 LMX1BO60663 402 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 FADS2O95864 444 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 CST4P01036 141 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 IGHV2-70P01814 119 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 RPSAP08865 295 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 HOXB4P17483 251 aaPredicted RBP10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 GATA3P23771 443 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 MDH2P40926 338 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 GSK3AP49840 483 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 MED21Q13503 144 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 OR8G1Q15617 311 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 SMN1Q16637 294 aaKnown RBP10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 Q6ZSR3 168 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 LRRC28Q86X40 367 aaPredicted RBP10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 OR5AS1Q8N127 324 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 OR11L1Q8NGX0 322 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 OR2AE1Q8NHA4 323 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 ITLN1Q8WWA0 313 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 RNFT2Q96EX2 444 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 POM121Q96HA1 1249 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 SIGLEC11Q96RL6 698 aa10.43□□□□□ -0.74
CLCNKA-205ENST00000477360 YTHDF1Q9BYJ9 559 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms