RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-211	ENST00000476855	HHLA2	Q9UM44	414 aa		13.64	□□□□□ -0.23
PSMD4-211	ENST00000476855	STUB1	Q9UNE7	303 aa		13.64	□□□□□ -0.23
PSMD4-211	ENST00000476855		V9GYS6	101 aa		13.64	□□□□□ -0.23
PSMD4-211	ENST00000476855	CHD3	Q12873	2000 aa	Known RBP	13.64	□□□□□ -0.23
PSMD4-211	ENST00000476855	PRRC2A	P48634	2157 aa	Known RBP	13.64	□□□□□ -0.23
PSMD4-211	ENST00000476855	LOC390937	A0A1W2PQ73	354 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	SHISA9	B4DS77	424 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855		H3BSH0	61 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	GABRP	O00591	440 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	LMX1B	O60663	402 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	GPX5	O75715	221 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	ATE1	O95260	518 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	GAL	P22466	123 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	RAD52	P43351	418 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	FAM3A	P98173	230 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	SNTB2	Q13425	540 aa	Known RBP	13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	GK2	Q14410	553 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	OR8B8	Q15620	311 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	MSMP	Q1L6U9	139 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	GFOD2	Q3B7J2	385 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	TMEM255A	Q5JRV8	349 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	C1orf174	Q8IYL3	243 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	NUP37	Q8NFH4	326 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	OR5L1	Q8NGL2	311 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	SLC25A40	Q8TBP6	338 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	GPR148	Q8TDV2	347 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	AKAP1	Q92667	903 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	RPL3L	Q92901	407 aa	Known RBP	13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	MARS2	Q96GW9	593 aa	Known RBP	13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	TMEM204	Q9BSN7	226 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	OR2J1	Q9GZK6	312 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	OPA3	Q9H6K4	179 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	ENPP5	Q9UJA9	477 aa		13.63	□□□□□ -0.23
PSMD4-211	ENST00000476855	TRBV5-7	A0A0A0MS05	114 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855		A0A1B0GVI7	797 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	TRDV1	A0A1B0GX56	115 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	DPPA5	A6NC42	116 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	CASK	O14936	926 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	SYT7	O43581	403 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	DHRS3	O75911	302 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	RGS9	O75916	674 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	GABARAP	O95166	117 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	HLA-DPB1	P04440	258 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	TUBG1	P23258	451 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	ACKR3	P25106	362 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	GLRX	P35754	106 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	PRSS12	P56730	875 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	MALL	Q13021	153 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	HLX	Q14774	488 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855		Q499Y3	187 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	ACSM3	Q53FZ2	586 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	SPATA46	Q5T0L3	261 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	GPR107	Q5VW38	600 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	ADAM5	Q6NVV9	412 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	UNQ6126/PRO20091	Q6UXV3	157 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	CCDC54	Q8NEL0	328 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	KBTBD8	Q8NFY9	601 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	HS3ST6	Q96QI5	342 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	OR14A2	Q96R54	314 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	TUBG2	Q9NRH3	451 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	CEPT1	Q9Y6K0	416 aa		13.62	□□□□□ -0.23
PSMD4-211	ENST00000476855	ARFGEF3	Q5TH69	2177 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	DHRS7C	A6NNS2	312 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	ZNF879	B4DU55	563 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855		H3BSA7	217 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	PIN1P1	O15428	100 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	PLAU	P00749	431 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	SERPINA3	P01011	423 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	CD3E	P07766	207 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	FOSL1	P15407	271 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	CFL1	P23528	166 aa	Known RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	FGF9	P31371	208 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	MPV17	P39210	176 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	GSK3A	P49840	483 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	DAZAP2	Q15038	168 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	ASPHD2	Q6ICH7	369 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	MRPL21	Q7Z2W9	205 aa	Known RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	COMMD2	Q86X83	199 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	CLVS1	Q8IUQ0	354 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	KLF14	Q8TD94	323 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	TMEM171	Q8WVE6	324 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	RADIL	Q96JH8	1075 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	DERL3	Q96Q80	235 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	PPIL3	Q9H2H8	161 aa	Known RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	DLL4	Q9NR61	685 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	ZNF275	Q9NSD4	429 aa	Predicted RBP	13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	SPEF1	Q9Y4P9	236 aa		13.61	□□□□□ -0.23
PSMD4-211	ENST00000476855	FLNA	P21333	2647 aa	Known RBP	13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855		A6NHS1	94 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	AIRE	O43918	545 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	GATB	O75879	557 aa	Known RBP	13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	UCHL1	P09936	223 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	OCM2	P0CE71	109 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	RAC2	P15153	192 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	ZNF250	P15622	560 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	THBS4	P35443	961 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	SOX2	P48431	317 aa		13.6	□□□□□ -0.23
PSMD4-211	ENST00000476855	PSG7	Q13046	419 aa		13.6	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 77 ms