RNA–Protein interactions for RNA: ENST00000476379.5

CCDC39-204, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 4,451 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-204ENST00000476379 GLDNQ6ZMI3 551 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SYT13Q7L8C5 426 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CXorf67Q86X51 503 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 GRAMD2AQ8IUY3 354 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CCDC36Q8IYA8 594 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF440Q8IYI8 595 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RNF113BQ8IZP6 322 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 APOBEC4Q8WW27 367 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SULT4A1Q9BR01 284 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 LRFN3Q9BTN0 628 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 NIT2Q9NQR4 276 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MED17Q9NVC6 651 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 AURKAIP1Q9NWT8 199 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ACAD8Q9UKU7 415 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 UBE2J1Q9Y385 318 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CUBNO60494 3623 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MEIKINA0A087WXM9 373 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 IGKV1D-43A0A0B4J1Z2 117 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 TRAV20A0A0B4J274 112 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SMCO3A2RU48 225 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PRSS37A4D1T9 235 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 OR5H15A6NDH6 313 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 A6NLC8 198 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 K7ESF4 209 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SULT1C2O00338 296 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CDK2AP1O14519 115 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RGS13O14921 159 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PLRG1O43660 514 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RAMP1O60894 148 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 LY86O95711 162 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 BTCP35070 178 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CBX5P45973 191 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 FASLGP48023 281 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 HERV-K104P61576 105 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SLC17A1Q14916 467 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 TESK1Q15569 626 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ELAVL1Q15717 326 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 C3AR1Q16581 482 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 OR2W3Q7Z3T1 314 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ADGRG3Q86Y34 549 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SPEM1Q8N4L4 309 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 DUSP18Q8NEJ0 188 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 C11orf40Q8WZ69 217 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RDH5Q92781 318 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 HAVCR1Q96D42 359 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 C12orf57Q99622 126 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 NKX6-2Q9C056 277 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SERINC1Q9NRX5 453 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 TAS2R8Q9NYW2 309 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PIGLQ9Y2B2 252 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SONP18583 2426 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CSMD2Q7Z408 3487 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ABCA2Q9BZC7 2435 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 TMEM212A6NML5 194 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 FAM166BA8MTA8 275 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 GPR37O15354 613 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SIGLEC6O43699 453 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 DUX1O43812 170 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 OR2F2O95006 317 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 IGHA1P01876 353 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 HLA-HP01893 362 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ADH6P28332 368 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ZNF121P58317 390 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RPL27P61353 136 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SNRPEP62304 92 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 RAB32Q13637 225 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SNTB1Q13884 538 aaKnown RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 KLF9Q13886 244 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 BATFQ16520 125 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MANEAQ5SRI9 462 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 TIGD3Q6B0B8 471 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 TMEM182Q6ZP80 229 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 BPHLQ86WA6 291 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CDH26Q8IXH8 852 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 MAML2Q8IZL2 1156 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PRSS35Q8N3Z0 413 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 ZFP62Q8NB50 900 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 DTWD2Q8NBA8 298 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 OR5D14Q8NGL3 314 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 WDR34Q96EX3 536 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 SCMH1Q96GD3 660 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 CALHM2Q9HA72 323 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PILRAQ9UKJ1 303 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 PADI1Q9ULC6 663 aa4.45□□□□□ -1.7
CCDC39-204ENST00000476379 COL4A4P53420 1690 aaPredicted RBP4.45□□□□□ -1.7
CCDC39-204ENST00000476379 hCG_1809904A0A1W2PP81 198 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 A0A1W2PPC4 97 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 A0A1W2PR64 198 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 A0A1W2PRV1 198 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ZFP92A6NM28 416 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CDRT15L2A8MXV6 281 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 D6RAR5 112 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 HSD17B6O14756 317 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 PHF1O43189 567 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 FOXS1O43638 330 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 CCL4P13236 92 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 NME1P15531 152 aaKnown RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 THBS2P35442 1172 aa4.44□□□□□ -1.7
CCDC39-204ENST00000476379 ELLP55199 621 aaPredicted RBP4.44□□□□□ -1.7
CCDC39-204ENST00000476379 MRPS34P82930 218 aaKnown RBP4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms