RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 CCDC77Q9BR77 488 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 SCRT1Q9BWW7 348 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 ANKRA2Q9H9E1 313 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 TMEM9BQ9NQ34 198 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 RFNGQ9Y644 331 aa2.79□□□□□ -1.96
PTCD3-211ENST00000476215 NAV1Q8NEY1 1877 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 ABCB11O95342 1321 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 WDR19Q8NEZ3 1342 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 ZNF236Q9UL36 1845 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 SPRR5A0A1B0GTR4 108 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 SERPINE3A8MV23 424 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 SIRPB1O00241 398 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 FKBP6O75344 327 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 RDH16O75452 317 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 FTH1P02794 183 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 LINC00869P0C866 280 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 GGT1P19440 569 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 SSTR5P35346 364 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 CCL23P55773 120 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 RCAN2Q14206 197 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 SF3A2Q15428 464 aaKnown RBP2.78□□□□□ -1.96
PTCD3-211ENST00000476215 COX19Q49B96 90 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 MBOAT1Q6ZNC8 495 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 CMTM1Q8IZ96 169 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 GTPBP8Q8N3Z3 284 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-211ENST00000476215 OR4A4PQ8NGN8 299 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 RNF139Q8WU17 664 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 DEDD2Q8WXF8 326 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 RGP1Q92546 391 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-211ENST00000476215 SLC38A4Q969I6 547 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 MRGPRFQ96AM1 343 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 EEF1AKMT3Q96AZ1 226 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 NEURL3Q96EH8 262 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 GALNT14Q96FL9 552 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 CAMK2N2Q96S95 79 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 TIMM17AQ99595 171 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 MTG1Q9BT17 334 aaPredicted RBP2.78□□□□□ -1.96
PTCD3-211ENST00000476215 ZDHHC4Q9NPG8 344 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 DDX19AQ9NUU7 478 aaKnown RBP2.78□□□□□ -1.96
PTCD3-211ENST00000476215 NMRK1Q9NWW6 199 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 RRP15Q9Y3B9 282 aaKnown RBP2.78□□□□□ -1.96
PTCD3-211ENST00000476215 TRIOO75962 3097 aa2.78□□□□□ -1.96
PTCD3-211ENST00000476215 COL11A1P12107 1806 aaPredicted RBP2.77□□□□□ -1.97
PTCD3-211ENST00000476215 A0A0G2JMZ2 1700 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 IGLV2-18A0A075B6J9 118 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 IGLV1-36A0A0B4J1U3 117 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 OR6C74A6NCV1 312 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 LYRM9A8MSI8 78 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 E7EWF7 191 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 ZBTB5O15062 677 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 CD3GP09693 182 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 POLR2MP0CAP2 368 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 PABPC4LP0CB38 370 aaKnown RBP2.77□□□□□ -1.97
PTCD3-211ENST00000476215 EIF3EP60228 445 aaKnown RBP2.77□□□□□ -1.97
PTCD3-211ENST00000476215 RAB10P61026 200 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 TRDNQ13061 729 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 SRSF5Q13243 272 aaKnown RBP2.77□□□□□ -1.97
PTCD3-211ENST00000476215 CHRNA6Q15825 494 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF726P1Q15940 193 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 C22orf42Q6IC83 251 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 TMEM205Q6UW68 189 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 DEFB128Q7Z7B8 93 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 OR8U1Q8NH10 309 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 PHOSPHO2Q8TCD6 241 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 PIFOQ8TCI5 191 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 LRRC29Q8WV35 223 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 ECHDC3Q96DC8 303 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 NARS2Q96I59 477 aaKnown RBP2.77□□□□□ -1.97
PTCD3-211ENST00000476215 NEUROG2Q9H2A3 272 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 WFDC1Q9HC57 220 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 PXMP2Q9NR77 195 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 MYH7P12883 1935 aa2.77□□□□□ -1.97
PTCD3-211ENST00000476215 MYH8P13535 1937 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 MYH4Q9Y623 1939 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 RAD50Q92878 1312 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 PLXNA1Q9UIW2 1896 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 TRAV40A0A0B4J280 105 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 TRBV11-1A0A0K0K1C0 115 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 ERICH2A1L162 156 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 OR2AG2A6NM03 316 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 CCDC169A6NNP5 214 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 L7N2F9 121 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 AP3B1O00203 1094 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 EIF3HO15372 352 aaKnown RBP eCLIP2.76□□□□□ -1.97
PTCD3-211ENST00000476215 ZNF207O43670 478 aaKnown RBP2.76□□□□□ -1.97
PTCD3-211ENST00000476215 CYTH3O43739 400 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 GCM2O75603 506 aaPredicted RBP2.76□□□□□ -1.97
PTCD3-211ENST00000476215 RBBP9O75884 186 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 YIF1AO95070 293 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 APCSP02743 223 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 EIF4EP06730 217 aaKnown RBP2.76□□□□□ -1.97
PTCD3-211ENST00000476215 HCAR3P49019 387 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 P2RX1P51575 399 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 TGM3Q08188 693 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 LRRC74AQ0VAA2 488 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 SELENBP1Q13228 472 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 QPRTQ15274 297 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 GPR107Q5VW38 600 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 CARD17Q5XLA6 110 aa2.76□□□□□ -1.97
PTCD3-211ENST00000476215 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms