RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 TMEM50BP56557 158 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 RAC1P63000 192 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 HLXQ14774 488 aaPredicted RBP12.38□□□□□ -0.43
UBXN11-214ENST00000475591 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 OR10K1Q8NGX5 313 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 CT55Q8WUE5 264 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 CCDC107Q8WV48 283 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 CST11Q9H112 138 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 FN3KRPQ9HA64 309 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 FOXD3Q9UJU5 478 aaPredicted RBP12.38□□□□□ -0.43
UBXN11-214ENST00000475591 PRELID1Q9Y255 219 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 LOXL2Q9Y4K0 774 aa12.38□□□□□ -0.43
UBXN11-214ENST00000475591 PPP3CBP16298 524 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 AP2S1P53680 142 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-214ENST00000475591 CSNK2A1P68400 391 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-214ENST00000475591 PPP1R1AQ13522 171 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 CLLU1Q5K131 121 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 DCAF12Q5T6F0 453 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 C3P1Q6ZMU1 363 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 TMUB2Q71RG4 321 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 PGAP1Q75T13 922 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 COMMD7Q86VX2 200 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 ADAD2Q8NCV1 583 aaKnown RBP12.37□□□□□ -0.43
UBXN11-214ENST00000475591 GJC3Q8NFK1 279 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 OR14L1PQ8NHC6 308 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 RHBDD1Q8TEB9 315 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 ROBO4Q8WZ75 1007 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 PIGQQ9BRB3 760 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 NAA11Q9BSU3 229 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-214ENST00000475591 ARL6Q9H0F7 186 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 DEPPQ9NTK1 212 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 TRAV14DV4A0A0A6YYC5 116 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 UBE2V2Q15819 145 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 SNAI3Q3KNW1 292 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 ESX1Q8N693 406 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 SSC4DQ8WTU2 575 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 TMEM59Q9BXS4 323 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 PLEK2Q9NYT0 353 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 ZNF107Q9UII5 783 aaPredicted RBP12.37□□□□□ -0.43
UBXN11-214ENST00000475591 PADI1Q9ULC6 663 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 NOP16Q9Y3C1 178 aaKnown RBP12.37□□□□□ -0.43
UBXN11-214ENST00000475591 AUP1Q9Y679 476 aa12.37□□□□□ -0.43
UBXN11-214ENST00000475591 COL27A1Q8IZC6 1860 aaPredicted RBP12.36□□□□□ -0.43
UBXN11-214ENST00000475591 P04436 131 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 PATE4P0C8F1 98 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 S100A11P31949 105 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 SUCLG1P53597 346 aaKnown RBP12.36□□□□□ -0.43
UBXN11-214ENST00000475591 MEF2DQ14814 521 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 WIPI1Q5MNZ9 446 aaPredicted RBP12.36□□□□□ -0.43
UBXN11-214ENST00000475591 ALKAL2Q6UX46 152 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 RAB3CQ96E17 227 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 ARHGAP5-AS1Q96IT6 56 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 SEC22AQ96IW7 307 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 PRRT1Q99946 306 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 KCNN3Q9UGI6 736 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 TMA7Q9Y2S6 64 aaKnown RBP12.36□□□□□ -0.43
UBXN11-214ENST00000475591 PINLYPA6NC86 204 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 LRRC3CA6NJW4 275 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 POM121CA8CG34 1229 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 VAMP5O95183 116 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 CD34P28906 385 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 ARPC4P59998 168 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 SIGLEC14Q08ET2 396 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 IKZF1Q13422 519 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 KISS1Q15726 138 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 FOXL2NBQ6ZUU3 175 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 GGNQ86UU5 652 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 BEST3Q8N1M1 668 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 OR2AE1Q8NHA4 323 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 ST8SIA4Q92187 359 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 PIGTQ969N2 578 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 ALKBH3Q96Q83 286 aaPredicted RBP12.36□□□□□ -0.43
UBXN11-214ENST00000475591 MICU1Q9BPX6 476 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 C1QTNF6Q9BXI9 259 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 ARRDC1-AS1Q9H2J1 176 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 SLC2A8Q9NY64 477 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 FBLN5Q9UBX5 448 aa12.36□□□□□ -0.43
UBXN11-214ENST00000475591 CCDC187A0A096LP49 1063 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 HMSDA8MTL9 139 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 STMND1H3BQB6 276 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 M0R135 149 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 CXCL13O43927 109 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 TRAPPC6AO75865 159 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 ZNF250P15622 560 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 HIST1H1DP16402 221 aaKnown RBP12.35□□□□□ -0.43
UBXN11-214ENST00000475591 ACP1P24666 158 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 CTSSP25774 331 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 ZNF133P52736 654 aaPredicted RBP12.35□□□□□ -0.43
UBXN11-214ENST00000475591 HGFACQ04756 655 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 MPPED2Q15777 294 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 MICBQ29980 383 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 LRRC37A5PQ49AS3 106 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 NHLRC3Q5JS37 347 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 PLXDC2Q6UX71 529 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 C20orf196Q8IYI0 205 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 KCNG3Q8TAE7 436 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 ZNF799Q96GE5 643 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 GSX2Q9BZM3 304 aa12.35□□□□□ -0.43
UBXN11-214ENST00000475591 CRLF2Q9HC73 371 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms