RNA–Protein interactions for RNA: ENST00000474871.5

NPHP3-206, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 4,493 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-206ENST00000474871 ROPN1LQ96C74 230 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 GUCD1Q96NT3 240 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 MGLLQ99685 303 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 DPAGT1Q9H3H5 408 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 CALML5Q9NZT1 146 aa4.31□□□□□ -1.72
NPHP3-206ENST00000474871 MAP1BP46821 2468 aaKnown RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MCRIP1C9JLW8 97 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 C9JQL5 133 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 PRSS23O95084 383 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CD160O95971 181 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 DCNP07585 359 aaKnown RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 ADH5P11766 374 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 GNB3P16520 340 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SDHBP21912 280 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 OPRD1P41143 372 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CNN1P51911 297 aaKnown RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 RUNX1Q01196 453 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MZT1Q08AG7 82 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 NKPD1Q17RQ9 610 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 XKR7Q5GH72 579 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TXNDC8Q6A555 127 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 Q6ZSR3 168 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CISD2Q8N5K1 135 aaKnown RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 IL22RA1Q8N6P7 574 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 KLHDC9Q8NEP7 349 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SH3RF2Q8TEC5 729 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 DNASE1L2Q92874 299 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 GALMQ96C23 342 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MRAP2Q96G30 205 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 REEP6Q96HR9 211 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 GPR174Q9BXC1 333 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 AMBRA1Q9C0C7 1298 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MANSC1Q9H8J5 431 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SLC6A20Q9NP91 592 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CD207Q9UJ71 328 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 B3GALT5Q9Y2C3 310 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 PLXNA4Q9HCM2 1894 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CENPFP49454 3210 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SLC38A8A6NNN8 435 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 PTGESO14684 152 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SLC31A1O15431 190 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 HCRTO43612 131 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CYB5AP00167 134 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 C1QAP02745 245 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 OMGP23515 440 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SLC6A2P23975 617 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CTRLP40313 264 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 KIR2DS4P43632 304 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 ZNF140P52738 457 aaPredicted RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CLDN12P56749 244 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SH3BP2P78314 561 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 ARG2P78540 354 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 RELBQ01201 579 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MLLT11Q13015 90 aaPredicted RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 ELOCQ15369 112 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM78Q5T7P6 136 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TXNRD3NBQ6F5E7 133 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SSX6Q7RTT6 188 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SAXO1Q8IYX7 474 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 ATP6V1C2Q8NEY4 427 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 PTPMT1Q8WUK0 201 aaPredicted RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 OVCA2Q8WZ82 227 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MIB2Q96AX9 1013 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MUS81Q96NY9 551 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 HDAC8Q9BY41 377 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 UBTD1Q9HAC8 227 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 GOLGA2P5Q9HBQ8 144 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 GPN1Q9HCN4 374 aaPredicted RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM100Q9NV29 134 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SNX10Q9Y5X0 201 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 MYO10Q9HD67 2058 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 SOX1O00570 391 aaPredicted RBP4.3□□□□□ -1.72
NPHP3-206ENST00000474871 P2RX6O15547 441 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 WASP42768 502 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TIGITQ495A1 244 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 OLIG3Q7RTU3 272 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 BPIFB2Q8N4F0 458 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 RORBQ92753 470 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 RNF183Q96D59 192 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 ATOH8Q96SQ7 321 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TBX5Q99593 518 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 NDC1Q9BTX1 674 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 TMEM133Q9H2Q1 129 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 EGLN3Q9H6Z9 239 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 CA10Q9NS85 328 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 PACSIN3Q9UKS6 424 aa4.3□□□□□ -1.72
NPHP3-206ENST00000474871 hCG_1818297A0A087WSY0 165 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM240BA0A1B0GVZ2 78 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ARL5CA6NH57 179 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A7PA6NKC0 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A22PA8MWA6 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A12PA8MX19 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 FAM90A23PA8MXZ1 464 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 M0R233 179 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ACTL6BO94805 426 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 HLA-DQA2P01906 255 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 PBX2P40425 430 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 RPL34P49207 117 aaKnown RBP4.29□□□□□ -1.72
NPHP3-206ENST00000474871 CRISP3P54108 245 aa4.29□□□□□ -1.72
NPHP3-206ENST00000474871 ISL1P61371 349 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms