RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 MAGEB4O15481 346 aaPredicted RBP11.64□□□□□ -0.55
USF1-205ENST00000473969 MLNRO43193 412 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 CD5LO43866 347 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 MTRF1O75570 445 aaKnown RBP11.64□□□□□ -0.55
USF1-205ENST00000473969 DBTP11182 482 aaKnown RBP11.64□□□□□ -0.55
USF1-205ENST00000473969 ATP6V1B1P15313 513 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 GABRB1P18505 474 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 MAP2K3P46734 347 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 IL18R1Q13478 541 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 KLHL22Q53GT1 634 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 AVPI1Q5T686 147 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 KCTD20Q7Z5Y7 419 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 THAP5Q7Z6K1 395 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 ACBD7Q8N6N7 88 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 ERGIC1Q969X5 290 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 SIGLEC11Q96RL6 698 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 ADI1Q9BV57 179 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 PAPOLGQ9BWT3 736 aaKnown RBP11.64□□□□□ -0.55
USF1-205ENST00000473969 RNPEPL1Q9HAU8 725 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 ABCB9Q9NP78 766 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 YAE1D1Q9NRH1 226 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 ZNF319Q9P2F9 582 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 AASSQ9UDR5 926 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 NUFIP1Q9UHK0 495 aaKnown RBP11.64□□□□□ -0.55
USF1-205ENST00000473969 OR52A1Q9UKL2 312 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 CACNG2Q9Y698 323 aa11.64□□□□□ -0.55
USF1-205ENST00000473969 IRGMA1A4Y4 181 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 PRR32B1ATL7 298 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 H0YAE9 185 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 DLGAP1O14490 977 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 ANOS1P23352 680 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 CAPGP40121 348 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 CD200P41217 278 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 CDH15P55291 814 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 ACTA2P62736 377 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 ACTG2P63267 376 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 ZNF91Q05481 1191 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 RAB40BQ12829 278 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 SPRNQ5BIV9 151 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 ZNF691Q5VV52 312 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 LIPNQ5VXI9 398 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 SSX6Q7RTT6 188 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 MOGAT3Q86VF5 341 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 C8orf59Q8N0T1 100 aaPredicted RBP11.63□□□□□ -0.55
USF1-205ENST00000473969 SEMA6DQ8NFY4 1073 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 OR51E1Q8TCB6 317 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 RAB39BQ96DA2 213 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 LGALS12Q96DT0 336 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 FAM71F1Q96KD3 344 aaPredicted RBP11.63□□□□□ -0.55
USF1-205ENST00000473969 GAL3ST1Q99999 423 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 MICU1Q9BPX6 476 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 FN3KRPQ9HA64 309 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 GCM1Q9NP62 436 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 AMBNQ9NP70 447 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 NKX1-2Q9UD57 310 aaPredicted RBP11.63□□□□□ -0.55
USF1-205ENST00000473969 PCDHB10Q9UN67 800 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 EXOGQ9Y2C4 368 aaKnown RBP11.63□□□□□ -0.55
USF1-205ENST00000473969 WIPI2Q9Y4P8 454 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 MPC1Q9Y5U8 109 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 NPTNQ9Y639 398 aa11.63□□□□□ -0.55
USF1-205ENST00000473969 ACANP16112 2415 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 CELSR1Q9NYQ6 3014 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 IGHV3-64DA0A0J9YX35 117 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 LOC100289279A0A1B0GTE1 492 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 A0A1B0GWJ7 208 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 A6NLC8 198 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 CLIC3O95833 236 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 GRPP07492 148 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 IGHV4-31P0DP07 118 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 RIPPLY3P57055 190 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 ZNF85Q03923 595 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 RIPPLY1Q0D2K3 151 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 OR8B8Q15620 311 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 TP53I3Q53FA7 332 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 PLPP7Q8NBV4 271 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 CLDND2Q8NHS1 167 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 ZNF420Q8TAQ5 688 aaPredicted RBP11.62□□□□□ -0.55
USF1-205ENST00000473969 PIGCQ92535 297 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 GPR84Q9NQS5 396 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 INPP5EQ9NRR6 644 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 UFSP2Q9NUQ7 469 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 RHBDD3Q9Y3P4 386 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 HSPE1-MOB4S4R3N1 261 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 VPS13CQ709C8 3753 aa11.62□□□□□ -0.55
USF1-205ENST00000473969 ZNF816-ZNF321PA0A0X1KG74 233 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 A0A1B0GVI7 797 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 J3QLW9 94 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 PNPP00491 289 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 ZNF19P17023 458 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 GATA4P43694 442 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 ADARB1P78563 741 aaKnown RBP11.61□□□□□ -0.55
USF1-205ENST00000473969 MFGE8Q08431 387 aaPredicted RBP11.61□□□□□ -0.55
USF1-205ENST00000473969 MAB21L1Q13394 359 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 MED21Q13503 144 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 PRAMEF6Q5VXH4 476 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 FAM166AQ6J272 317 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 KCTD8Q6ZWB6 473 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 ELMOD2Q8IZ81 293 aa11.61□□□□□ -0.55
USF1-205ENST00000473969 MUC20Q8N307 709 aaPredicted RBP11.61□□□□□ -0.55
USF1-205ENST00000473969 KLHL36Q8N4N3 616 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms