RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 MRM2Q9UI43 246 aaKnown RBP5.54□□□□□ -1.52
HDAC1-205ENST00000472928 STUB1Q9UNE7 303 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 GTF2A1LQ9UNN4 478 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 RABL2BQ9UNT1 228 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 LRP12Q9Y561 859 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 N6AMT1Q9Y5N5 214 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 LHFPL6Q9Y693 200 aa5.54□□□□□ -1.52
HDAC1-205ENST00000472928 A0A1W2PPW3 197 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 OR6C65A6NJZ3 312 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 A8MV72 311 aaPredicted RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TMCC2O75069 709 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SS18L1O75177 396 aaPredicted RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 CELP19835 753 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 UGT2B10P36537 528 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TGFBR1P36897 503 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 GUCA1AP43080 201 aaPredicted RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 GDI2P50395 445 aaKnown RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 BMXP51813 675 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 RIDAP52758 137 aaKnown RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 VBP1P61758 197 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 NCS1P62166 190 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SLC3A1Q07837 685 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ACSM1Q08AH1 577 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 AQP6Q13520 282 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TPBGQ13641 420 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ENDOGQ14249 297 aaKnown RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF846Q147U1 533 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 KCNMB1Q16558 191 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 CTF1Q16619 201 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 PCK2Q16822 640 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TEX30Q5JUR7 227 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF684Q5T5D7 378 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TSPO2Q5TGU0 170 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 C9orf135Q5VTT2 229 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 KCTD18Q6PI47 426 aaPredicted RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 KLHL24Q6TFL4 600 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 CFAP77Q6ZQR2 320 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 DNM1P46Q6ZS02 220 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 KRT77Q7Z794 578 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 UBE2J2Q8N2K1 259 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 LRRC18Q8N456 261 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 CNEP1R1Q8N9A8 125 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 KBTBD8Q8NFY9 601 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 OR2AJ1Q8NGZ0 328 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ST7LQ8TDW4 575 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TMEM171Q8WVE6 324 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 HSD17B8Q92506 261 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TMEM203Q969S6 136 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 STARD4Q96DR4 205 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SLAMF6Q96DU3 332 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SMIM19Q96E16 107 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 OR8B4Q96RC9 309 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 FOXB1Q99853 325 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 MED18Q9BUE0 208 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ZNF416Q9BWM5 594 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 LINC00470Q9BZP3 86 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 ELOVL3Q9HB03 270 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 GLRX2Q9NS18 164 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SLC7A10Q9NS82 523 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 TMEM38BQ9NVV0 291 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 PARPBPQ9NWS1 579 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 BABAM2Q9NXR7 383 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SLCO1C1Q9NYB5 712 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 UPB1Q9UBR1 384 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 CYB5R1Q9UHQ9 305 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SSR3Q9UNL2 185 aa5.53□□□□□ -1.52
HDAC1-205ENST00000472928 SIRT4Q9Y6E7 314 aaPredicted RBP5.53□□□□□ -1.52
HDAC1-205ENST00000472928 PRKDCP78527 4128 aaKnown RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 A0A096LNT2 108 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 FAM172BPA6NC97 362 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 ZNF878C9JN71 531 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 OVOL3O00110 214 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 GPX5O75715 221 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 PLAUP00749 431 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 TACSTD2P09758 323 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 H2BFMP0C1H6 154 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 NPR2P20594 1047 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 PSMA1P25786 263 aaKnown RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 HSD11B1P28845 292 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 OPRL1P41146 370 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 OR3A2P47893 321 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 SERPINB10P48595 397 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 TGM4P49221 684 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 LSM6P62312 80 aaKnown RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 MRPS34P82930 218 aaKnown RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 ROM1Q03395 351 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 MFGE8Q08431 387 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 FAPQ12884 760 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 MRPL28Q13084 256 aaKnown RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 KIR3DS1Q14943 382 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 GUSBP1Q15486 140 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 LIPNQ5VXI9 398 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 DMKNQ6E0U4 476 aaPredicted RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 OR2A2Q6IF42 318 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 RPL22L1Q6P5R6 122 aaKnown RBP5.52□□□□□ -1.53
HDAC1-205ENST00000472928 VWA1Q6PCB0 445 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 TFAP2EQ6VUC0 442 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 ZNF813Q6ZN06 617 aa5.52□□□□□ -1.53
HDAC1-205ENST00000472928 ZNF704Q6ZNC4 412 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms