RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 OR51F2Q8NH61 342 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 TSEN15Q8WW01 171 aaKnown RBP2.66□□□□□ -1.98
CLK1-209ENST00000472679 RAB1CQ92928 201 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 MYCBPQ99417 103 aaPredicted RBP2.66□□□□□ -1.98
CLK1-209ENST00000472679 C11orf70Q9BRQ4 267 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 TOLLIPQ9H0E2 274 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 LINC00574Q9H8X3 128 aa2.66□□□□□ -1.98
CLK1-209ENST00000472679 ADGRL1O94910 1474 aa2.65□□□□□ -1.98
CLK1-209ENST00000472679 SHROOM3Q8TF72 1996 aa2.65□□□□□ -1.98
CLK1-209ENST00000472679 IGKV3D-11A0A0A0MRZ8 115 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 ERI3O43414 337 aaKnown RBP2.65□□□□□ -1.99
CLK1-209ENST00000472679 CACNG3O60359 315 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 SLC16A7O60669 478 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 DNAJB6O75190 326 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 CNMDO75829 334 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 IGLV2-8P01709 118 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 CD28P10747 220 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 MYL9P24844 172 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 TGFBR1P36897 503 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 LUZP6Q538Z0 58 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 DEGS2Q6QHC5 323 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 C16orf47Q6ZP98 133 aaPredicted RBP2.65□□□□□ -1.99
CLK1-209ENST00000472679 TMEM136Q6ZRR5 245 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 ERO1BQ86YB8 467 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 KRTAP13-1Q8IUC0 172 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 OFCC1Q8IZS5 231 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 VKORC1L1Q8N0U8 176 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 UBAC2Q8NBM4 344 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 TMEM104Q8NE00 496 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 C1orf64Q8NEQ6 169 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 OR1L1Q8NH94 360 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 RERGQ96A58 199 aaPredicted RBP2.65□□□□□ -1.99
CLK1-209ENST00000472679 GPR82Q96P67 336 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 KCNS3Q9BQ31 491 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 CALN1Q9BXU9 219 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 PIGUQ9H490 435 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 ELOVL6Q9H5J4 265 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 RBFOX1Q9NWB1 397 aaKnown RBP2.65□□□□□ -1.99
CLK1-209ENST00000472679 HES2Q9Y543 173 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 LRRC42Q9Y546 428 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 MROH7Q68CQ1 1323 aa2.65□□□□□ -1.99
CLK1-209ENST00000472679 COL5A1P20908 1838 aaPredicted RBP2.64□□□□□ -1.99
CLK1-209ENST00000472679 SLC19A2O60779 497 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 SPIN3Q5JUX0 258 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 STUMQ69YW2 141 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 MED27Q6P2C8 311 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 DRAM1Q8N682 238 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 SHANK2-AS3Q9BTD1 123 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 CSNK1G1Q9HCP0 422 aa2.64□□□□□ -1.99
CLK1-209ENST00000472679 TRIP11Q15643 1979 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 M0R1X1 148 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 GATBO75879 557 aaKnown RBP2.63□□□□□ -1.99
CLK1-209ENST00000472679 PRKACBP22694 351 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 RPS11P62280 158 aaKnown RBP eCLIP2.63□□□□□ -1.99
CLK1-209ENST00000472679 FLI1Q01543 452 aaPredicted RBP2.63□□□□□ -1.99
CLK1-209ENST00000472679 IRF8Q02556 426 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 PRSS54Q6PEW0 395 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 CDS1Q92903 461 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 MYEF2Q9P2K5 600 aaKnown RBP2.63□□□□□ -1.99
CLK1-209ENST00000472679 TBC1D24Q9ULP9 559 aa2.63□□□□□ -1.99
CLK1-209ENST00000472679 A0A0A6YYD5 115 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 TDP2O95551 362 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 TRBV12-3P01733 135 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 KRT16P08779 473 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 P0C880 135 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 HSPD1P10809 573 aaKnown RBP2.62□□□□□ -1.99
CLK1-209ENST00000472679 RAB5AP20339 215 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 IDH2P48735 452 aaKnown RBP2.62□□□□□ -1.99
CLK1-209ENST00000472679 IFITM3Q01628 133 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 MAD2L1BPQ15013 274 aaPredicted RBP2.62□□□□□ -1.99
CLK1-209ENST00000472679 GABRA6Q16445 453 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 WDR82Q6UXN9 313 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 C8orf31Q8N9H6 132 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 OR2Z1Q8NG97 314 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 DCAKDQ8WVC6 231 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 PLEKHF2Q9H8W4 249 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 LYRM4Q9HD34 91 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 TAS2R5Q9NYW4 299 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 ZNF391Q9UJN7 358 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 YARS2Q9Y2Z4 477 aaKnown RBP2.62□□□□□ -1.99
CLK1-209ENST00000472679 SAR1BQ9Y6B6 198 aa2.62□□□□□ -1.99
CLK1-209ENST00000472679 SDK2Q58EX2 2172 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 IGKV2-24A0A0C4DH68 120 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 MANBAO00462 879 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 MFNGO00587 321 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 UBCP0CG48 685 aaKnown RBP2.61□□□□□ -1.99
CLK1-209ENST00000472679 TAS2R43P59537 309 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 MEF2BQ02080 365 aaPredicted RBP2.61□□□□□ -1.99
CLK1-209ENST00000472679 BAMBIQ13145 260 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 TBPL2Q6SJ96 375 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 ZNF547Q8IVP9 402 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 ZNF680Q8NEM1 530 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 ENKURQ8TC29 256 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 GPR21Q99679 349 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 AUNIPQ9H7T9 357 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 MRPS30Q9NP92 439 aaKnown RBP2.61□□□□□ -1.99
CLK1-209ENST00000472679 ZNF257Q9Y2Q1 563 aa2.61□□□□□ -1.99
CLK1-209ENST00000472679 CAB39Q9Y376 341 aaPredicted RBP2.61□□□□□ -1.99
CLK1-209ENST00000472679 KIR2DS1A0A191URI9 304 aa2.6□□□□□ -1.99
CLK1-209ENST00000472679 SERTM2A0A1B0GWG4 89 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms