RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 ZNF74Q16587 644 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 TCEAL5Q5H9L2 206 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 PHF19Q5T6S3 580 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 HIST2H3PS2Q5TEC6 136 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 OPN5Q6U736 354 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 LINC00114Q6XXX2 140 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF765Q7L2R6 523 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 OR52N4Q8NGI2 321 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF775Q96BV0 537 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 MRPL37Q9BZE1 423 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 BANF2Q9H503 90 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 STARD5Q9NSY2 213 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF107Q9UII5 783 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 SLCO1B1Q9Y6L6 691 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 IGKV1D-42A0A075B6H8 117 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 MEGF11A6BM72 1044 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 TRGC1P0CF51 173 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 GLI4P10075 376 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 AFF3P51826 1226 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 PSG6Q00889 435 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 PRICKLE4Q2TBC4 344 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 MED25Q71SY5 747 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 P4HA3Q7Z4N8 544 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 FNDC9Q8TBE3 224 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 GPBAR1Q8TDU6 330 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 KTI12Q96EK9 354 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 SERINC2Q96SA4 455 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 PRRX2Q99811 253 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 GPR132Q9UNW8 380 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 LRP12Q9Y561 859 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 RTTNQ86VV8 2226 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 NUP210LQ5VU65 1888 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 BORCS7-ASMTA0A0B4J1R7 106 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 LOC101059948A0A1B0GTJ6 334 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 GEMIN2O14893 280 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 MPZL1O95297 269 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 DIRAS3O95661 229 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 GPR75O95800 540 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 HCKP08631 526 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 JMJD7P0C870 316 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 GABRA4P48169 554 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 RPS4XP62701 263 aaKnown RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 SPEM2Q0P670 501 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 KCTD18Q6PI47 426 aaPredicted RBP8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 ANKRD33Q7Z3H0 272 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 RD3Q7Z3Z2 195 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 COMMD2Q86X83 199 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 LINC00346Q8IVM7 164 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 C17orf78Q8N4C9 275 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 METTL21AQ8WXB1 218 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB11FIP5Q9BXF6 653 aa8.49□□□□□ -1.05
NHLRC3-203ENST00000470258 ADAM10O14672 748 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 NUDT21O43809 227 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 APBB3O95704 486 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 PTBP3O95758 552 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF25P17030 456 aaPredicted RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 APLNRP35414 380 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ADPRHP54922 357 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 NUTF2P61970 127 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 RELQ04864 619 aaPredicted RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ELOBQ15370 118 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 PLXDC2Q6UX71 529 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ERN2Q76MJ5 926 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 PEG10Q86TG7 708 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 SFTPA1Q8IWL2 248 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 FRZBQ92765 325 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 RSPRY1Q96DX4 576 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 COX14Q96I36 57 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ABHD6Q9BV23 337 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ADAM19Q9H013 955 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 EHFQ9NZC4 300 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 TP53TG5Q9Y2B4 290 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 HIF3AQ9Y2N7 669 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 MRPS23Q9Y3D9 190 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 RFNGQ9Y644 331 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 CDRT15L2A8MXV6 281 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 VSIG8P0DPA2 414 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 RAB4BP61018 213 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 DLK1P80370 383 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 FAM3AP98173 230 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 MVB12AQ96EY5 273 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 MMP25Q9NPA2 562 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 SIRT7Q9NRC8 400 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 INSL6Q9Y581 213 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 SERINC4A6NH21 518 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 PRRT4C9JH25 899 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 K7EQS6 105 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 LDLRAD4O15165 306 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 CTSVO60911 334 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 NKX2-2O95096 273 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 DANCRP0C864 163 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 THEGLP0DJG4 465 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 P2RY2P41231 377 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 WASP42768 502 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 RPS15AP62244 130 aaKnown RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 CSNK2A1P68400 391 aaPredicted RBP8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 CSNK2A3Q8NEV1 391 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 ZNF558Q96NG5 402 aa8.48□□□□□ -1.05
NHLRC3-203ENST00000470258 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms