RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 GID8Q9NWU2 228 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 CYB5R1Q9UHQ9 305 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 RCL1Q9Y2P8 373 aaKnown RBP3.11□□□□□ -1.91
COL11A1-208ENST00000470170 MMACHCQ9Y4U1 282 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 ARL5AQ9Y689 179 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NACADO15069 1562 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 ZNF532Q9HCE3 1301 aa3.11□□□□□ -1.91
COL11A1-208ENST00000470170 NCOA3Q9Y6Q9 1424 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TRAV8-7A0A075B6U6 113 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TRBV7-9A0A0J9YWB2 115 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 A0A1W2PRG6 482 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 VPS37CA5D8V6 355 aaPredicted RBP3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TVP23AA6NH52 213 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 C2orf74A8MZ97 194 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ENSAO43768 121 aaKnown RBP3.1□□□□□ -1.91
COL11A1-208ENST00000470170 KRT75O95678 551 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 SNAP29O95721 258 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 RAB36O95755 333 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 SERPINA1P01009 418 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 JCHAINP01591 159 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TCRBP04435 133 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ISG15P05161 165 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 LGALS2P05162 132 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 THRAP10827 490 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 UCHL3P15374 230 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 PVALBP20472 110 aaPredicted RBP3.1□□□□□ -1.91
COL11A1-208ENST00000470170 CRABP2P29373 138 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 SERPINB8P50452 374 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 FBXW4P57775 412 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 RHOAP61586 193 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 HMGCS1Q01581 520 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 BCL2L1Q07817 233 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 PUDPQ08623 228 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 IL18R1Q13478 541 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 OR5I1Q13606 314 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 RAB31Q13636 194 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 LAGE3Q14657 143 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 PTGES3Q15185 160 aaKnown RBP3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TMEM176BQ3YBM2 270 aaPredicted RBP3.1□□□□□ -1.91
COL11A1-208ENST00000470170 CHRFAM7AQ494W8 412 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ACSM3Q53FZ2 586 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 HACD4Q5VWC8 232 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 SYPL2Q5VXT5 272 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 UFSP1Q6NVU6 142 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 NIPAL1Q6NVV3 410 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TMEM25Q86YD3 366 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 OR1S2Q8NGQ3 325 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 OR5B3Q8NH48 314 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 BLOC1S5Q8TDH9 187 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ADAMTS16Q8TE57 1224 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TCTEX1D2Q8WW35 142 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 NELFBQ8WX92 580 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 HSFY1Q96LI6 401 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 TEAD3Q99594 435 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 NIPSNAP1Q9BPW8 284 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 RTBDNQ9BSG5 229 aaPredicted RBP3.1□□□□□ -1.91
COL11A1-208ENST00000470170 SCRT1Q9BWW7 348 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 DSN1Q9H410 356 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ZNF385DQ9H6B1 395 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ABCB9Q9NP78 766 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ISYNA1Q9NPH2 558 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 LGALS13Q9UHV8 139 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 ERGIC3Q9Y282 383 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 MTCH2Q9Y6C9 303 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 C9orf84Q5VXU9 1444 aa3.1□□□□□ -1.91
COL11A1-208ENST00000470170 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 KIR2DS1A0A191URI9 304 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 SLC5A10A0PJK1 596 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 ANKRD20A5PA0PJZ0 165 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 EFCAB10A6NFE3 127 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 OR2AT4A6NND4 320 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 LYRM9A8MSI8 78 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 H3BMQ9 156 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 K7EN84 100 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 DFFAO00273 331 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 HSD17B6O14756 317 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PFDN6O15212 129 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 CDC40O60508 579 aaKnown RBP eCLIP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 RAMP1O60894 148 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 KRTAP5-8O75690 187 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 TDP2O95551 362 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 ATP6V1G2O95670 118 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 GCGP01275 180 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 SERPINA5P05154 406 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 TACSTD2P09758 323 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 ACSM4P0C7M7 580 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 C8orf88P0DMB2 117 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 ZNF35P13682 527 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 SERPINB1P30740 379 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 CYB561P49447 251 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 SSR4P51571 173 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PSME3P61289 254 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 LSM6P62312 80 aaKnown RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 MLLT11Q13015 90 aaPredicted RBP3.09□□□□□ -1.91
COL11A1-208ENST00000470170 SMCO1Q147U7 214 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 KIR2DS1Q14954 304 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 OXA1LQ15070 435 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 PON3Q15166 354 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 CCNJQ5T5M9 372 aa3.09□□□□□ -1.91
COL11A1-208ENST00000470170 CPTPQ5TA50 214 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms