RNA–Protein interactions for RNA: ENST00000468565.1

COL27A1-203, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 1,946 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-203ENST00000468565 CFL1P23528 166 aaKnown RBP12.41□□□□□ -0.42
COL27A1-203ENST00000468565 APLNRP35414 380 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 MZT2AQ6P582 158 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 CCBE1Q6UXH8 406 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-203ENST00000468565 DPY19L2P2Q6ZN68 376 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 GDPD3Q7L5L3 318 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 PAQR4Q8N4S7 273 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-203ENST00000468565 GDPD1Q8N9F7 314 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 PIMREGQ9BSJ6 248 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 WACQ9BTA9 647 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 A0A1W2PPL8 197 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 M0R233 179 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 LAP3P28838 519 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 RAD52P43351 418 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 PCBD1P61457 104 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 ZNF79Q15937 498 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 ZNF362Q5T0B9 420 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-203ENST00000468565 LCN1P1Q5VSP4 162 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 RGS7BPQ6MZT1 257 aaPredicted RBP12.41□□□□□ -0.42
COL27A1-203ENST00000468565 SYT9Q86SS6 491 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 CPEB3Q8NE35 698 aaKnown RBP12.41□□□□□ -0.42
COL27A1-203ENST00000468565 BCL2L14Q9BZR8 327 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 MS4A5Q9H3V2 200 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 ADGRL4Q9HBW9 690 aa12.41□□□□□ -0.42
COL27A1-203ENST00000468565 ANK3Q12955 4377 aaKnown RBP12.4□□□□□ -0.42
COL27A1-203ENST00000468565 TEX13CA0A0J9YWL9 993 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 INAFM1C9JVW0 142 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 H7C1C5 153 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 TXNDC12O95881 172 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 MRPL3P09001 348 aaKnown RBP12.4□□□□□ -0.42
COL27A1-203ENST00000468565 FAM157BP0CG42 384 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 CCL2P13500 99 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 APEHP13798 732 aaKnown RBP12.4□□□□□ -0.42
COL27A1-203ENST00000468565 STOMP27105 288 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 APEX1P27695 318 aaKnown RBP12.4□□□□□ -0.42
COL27A1-203ENST00000468565 EIF2B2P49770 351 aaKnown RBP12.4□□□□□ -0.42
COL27A1-203ENST00000468565 LCN6P62502 163 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 PSG4Q00888 419 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 SCN1BQ07699 218 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 TMEM249Q2WGJ8 235 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 CYB561A3Q8NBI2 242 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 OR52E2Q8NGJ4 325 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 HPS1Q92902 700 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 SYT3Q9BQG1 590 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 OR2H1Q9GZK4 316 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 VSX1Q9NZR4 365 aaPredicted RBP12.4□□□□□ -0.42
COL27A1-203ENST00000468565 ADAM30Q9UKF2 790 aa12.4□□□□□ -0.42
COL27A1-203ENST00000468565 SONP18583 2426 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 SMIM30A4D0T7 59 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 GSTT2P0CG29 244 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 GSTT2BP0CG30 244 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 IL7P13232 177 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 DAOP14920 347 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 NAT1P18440 290 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 USF1P22415 310 aaPredicted RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 AZGP1P25311 298 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 NR4A2P43354 598 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 MTNR1BP49286 362 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 UCP2P55851 309 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 LRP11Q86VZ4 500 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ZCCHC24Q8N2G6 241 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 RASD2Q96D21 266 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 POM121L2Q96KW2 1035 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 TBC1D24Q9ULP9 559 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 TIMM10BQ9Y5J6 103 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 IER3IP1Q9Y5U9 82 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 IGLV3-9A0A075B6K5 115 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 IMPA2O14732 288 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 CLUP10909 449 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ZNF250P15622 560 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 SELENOVP59797 346 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ENDOGQ14249 297 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 PYDC2Q56P42 97 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ZMAT1Q5H9K5 638 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 MALRD1Q5VYJ5 2156 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.39□□□□□ -0.432e-12■■■■□ 25.3
COL27A1-203ENST00000468565 METAP1DQ6UB28 335 aaPredicted RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 TMEM91Q6ZNR0 172 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 C1orf174Q8IYL3 243 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 OR4K13Q8NH42 304 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 AKR7LQ8NHP1 331 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ACOT12Q8WYK0 555 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 MRPL48Q96GC5 212 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 DCLRE1CQ96SD1 692 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ATF6BQ99941 703 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 ZNF416Q9BWM5 594 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 WNT5BQ9H1J7 359 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 SYT4Q9H2B2 425 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 MYEF2Q9P2K5 600 aaKnown RBP12.39□□□□□ -0.43
COL27A1-203ENST00000468565 COMMD3Q9UBI1 195 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 GRIP1Q9Y3R0 1128 aa12.39□□□□□ -0.43
COL27A1-203ENST00000468565 J3QLW9 94 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 PLPP2O43688 288 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 IDH3BO43837 385 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 ICMTO60725 284 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 KHDRBS3O75525 346 aaKnown RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 HIST1H1CP16403 213 aaKnown RBP12.38□□□□□ -0.43
COL27A1-203ENST00000468565 CTLA4P16410 223 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 ZNF19P17023 458 aa12.38□□□□□ -0.43
COL27A1-203ENST00000468565 PTBP1P26599 531 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■■■□□ 17.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms