RNA–Protein interactions for RNA: ENST00000468018.5

ATG4B-215, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 721 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-215ENST00000468018 PRAMEF6Q5VXH4 476 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 KCTD18Q6PI47 426 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 GID4Q8IVV7 300 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 ZNF679Q8IYX0 411 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 C1orf87Q8N0U7 546 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 KLHL36Q8N4N3 616 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 RFLNBQ8N5W9 214 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 OR8B12Q8NGG6 310 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 DVL3Q92997 716 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 IL4I1Q96RQ9 567 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 CNN2Q99439 309 aaKnown RBP12.71□□□□□ -0.37
ATG4B-215ENST00000468018 MNTQ99583 582 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 UBAP1Q9NZ09 502 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 ZNF391Q9UJN7 358 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 TMEM14AQ9Y6G1 99 aa12.71□□□□□ -0.37
ATG4B-215ENST00000468018 LRRC30A6NM36 301 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 J3QLI3 93 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 EI24O14681 340 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 FAM20BO75063 409 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 ZNF254O75437 659 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 WNT2P09544 360 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 GATA3P23771 443 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 ACKR3P25106 362 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 GSK3AP49840 483 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 FAM201AQ5SY85 155 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 KRT77Q7Z794 578 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 WDR86Q86TI4 376 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-215ENST00000468018 OR8J1Q8NGP2 316 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 ASB17Q8WXJ9 295 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 ITFG2Q969R8 447 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 DACT3Q96B18 629 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-215ENST00000468018 PGAM5Q96HS1 289 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 HRASLS5Q96KN8 279 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 MROQ9BYG7 248 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 N6AMT1Q9Y5N5 214 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 COL6A5A8TX70 2615 aa12.7□□□□□ -0.38
ATG4B-215ENST00000468018 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 A0A0U1RQV5 110 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 A0A0X1KG70 313 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 ANKRD30BLA7E2S9 258 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 TNFRSF13BO14836 293 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-215ENST00000468018 FOXH1O75593 365 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 LHBP01229 141 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 HTR1FP30939 366 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 ALDH3A2P51648 485 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 PAX2Q02962 417 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 C11orf53Q8IXP5 236 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 CSNK2A3Q8NEV1 391 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 OR4M2Q8NGB6 313 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 ITPKCQ96DU7 683 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 TMEM246Q9BRR3 403 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 TLNRD1Q9H1K6 362 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 RIBC2Q9H4K1 309 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 FN3KRPQ9HA64 309 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 S100A14Q9HCY8 104 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 BRD7Q9NPI1 651 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 CLN6Q9NWW5 311 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-215ENST00000468018 H2AFY2Q9P0M6 372 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-215ENST00000468018 WARS2Q9UGM6 360 aaKnown RBP12.69□□□□□ -0.38
ATG4B-215ENST00000468018 LRCH1Q9Y2L9 728 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 PPIAL4AQ9Y536 164 aa12.69□□□□□ -0.38
ATG4B-215ENST00000468018 PSMD9O00233 223 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 PHYHO14832 338 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 ZNF205O95201 554 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 CST4P01036 141 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 FSHBP01225 129 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 CXCR4P61073 352 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 HOXA4Q00056 320 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-215ENST00000468018 EGR3Q06889 387 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 MZT1Q08AG7 82 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 TMED1Q13445 227 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 FAM76BQ5HYJ3 339 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 SLC25A30Q5SVS4 291 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 SLC35F2Q8IXU6 374 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 C10orf67Q8IYJ2 551 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 GCSAMQ8N6F7 178 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 OR11L1Q8NGX0 322 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 TRUB1Q8WWH5 349 aaKnown RBP12.68□□□□□ -0.38
ATG4B-215ENST00000468018 EME1Q96AY2 570 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 PPP1R3EQ9H7J1 279 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 UFSP2Q9NUQ7 469 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 RNF7Q9UBF6 113 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 MIOXQ9UGB7 285 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 NUFIP1Q9UHK0 495 aaKnown RBP12.68□□□□□ -0.38
ATG4B-215ENST00000468018 OPN4Q9UHM6 478 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 PCDHB10Q9UN67 800 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 RHBDD3Q9Y3P4 386 aa12.68□□□□□ -0.38
ATG4B-215ENST00000468018 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.67□□□□□ -0.38
ATG4B-215ENST00000468018 TMEM269A0A1B0GVZ9 245 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 TRAPPC2LH3BP13 241 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 ZNF12P17014 697 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 CFHR2P36980 270 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 PSMB10P40306 273 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 RIDAP52758 137 aaKnown RBP12.67□□□□□ -0.38
ATG4B-215ENST00000468018 LCN2P80188 198 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 ZNF154Q13106 437 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 SNCBQ16143 134 aa12.67□□□□□ -0.38
ATG4B-215ENST00000468018 TUSC1Q2TAM9 212 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms