RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ENTPD1P49961 510 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 KRTAP10-3P60369 221 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 SAMD4BQ5PRF9 694 aaKnown RBP14.25□□□□□ -0.13
TRIM56-203ENST00000467847 RHOUQ7L0Q8 258 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 SLC37A3Q8NCC5 494 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 OR9Q2Q8NGE9 314 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 MMP27Q9H306 513 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 CNTD2Q9H8S5 307 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 KAAG1Q9UBP8 84 aa14.25□□□□□ -0.13
TRIM56-203ENST00000467847 RPUSD1Q9UJJ7 312 aaKnown RBP14.25□□□□□ -0.13
TRIM56-203ENST00000467847 ZNF878C9JN71 531 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 ZNF593O00488 134 aaPredicted RBP14.24□□□□□ -0.13
TRIM56-203ENST00000467847 TBX1O43435 398 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 KRT36O76013 467 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 GYPBP06028 91 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 FMO3P31513 532 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 DDOSTP39656 456 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 IER3P46695 156 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 PCK2Q16822 640 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 MICBQ29980 383 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 CDONQ4KMG0 1287 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 HIST2H2BDQ6DRA6 164 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 VMO1Q7Z5L0 202 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 LDLRAD3Q86YD5 345 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 ZNF511Q8NB15 262 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 LINC01006Q8NI28 216 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 LRRC29Q8WV35 223 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 SPSB4Q96A44 273 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 BTBD10Q9BSF8 475 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 TBC1D23Q9NUY8 699 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 IL20Q9NYY1 176 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 ONECUT1Q9UBC0 465 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 CD300AQ9UGN4 299 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 FAM96BQ9Y3D0 163 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 KPTNQ9Y664 436 aa14.24□□□□□ -0.13
TRIM56-203ENST00000467847 PRKDCP78527 4128 aaKnown RBP14.24□□□□□ -0.13
TRIM56-203ENST00000467847 A0A1B0GW55 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 TNFRSF11BO00300 401 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 ANXA2P07355 339 aaKnown RBP14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L2P0CJ85 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L3P0CJ86 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L4P0CJ87 422 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L5P0CJ88 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L6P0CJ89 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L7P0CJ90 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 MUC1P15941 1255 aaPredicted RBP14.23□□□□□ -0.13
TRIM56-203ENST00000467847 SLC15A1P46059 708 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 CRMP1Q14194 572 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 TIGD6Q17RP2 521 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4L9Q6RFH8 374 aaPredicted RBP14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DPY19L4Q7Z388 723 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 WDR86Q86TI4 376 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 PGAM4Q8N0Y7 254 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 FGFRL1Q8N441 504 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 PIP4P2Q8N4L2 257 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 LINC00471Q8N535 108 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 OR8D4Q8NGM9 314 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 OR6K6Q8NGW6 343 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 UBE2FQ969M7 185 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 CDRT15Q96T59 188 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 CCL13Q99616 98 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 RBM4BQ9BQ04 359 aaKnown RBP14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DPAGT1Q9H3H5 408 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 RNPEPL1Q9HAU8 725 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 DUX4Q9UBX2 424 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 LYVE1Q9Y5Y7 322 aa14.23□□□□□ -0.13
TRIM56-203ENST00000467847 A0A1B0GVI7 797 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 DHRS12A0PJE2 317 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 GASTP01350 101 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 SPI1P17947 270 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 HSD11B1P28845 292 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 CX3CR1P49238 355 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 HMGA2P52926 109 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 GRB2P62993 217 aaKnown RBP14.22□□□□□ -0.13
TRIM56-203ENST00000467847 ELF3P78545 371 aaPredicted RBP14.22□□□□□ -0.13
TRIM56-203ENST00000467847 FAM3AP98173 230 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 WDR38Q5JTN6 314 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 TEX30Q5JUR7 227 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 ASPHD2Q6ICH7 369 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 GDPGP1Q6ZNW5 385 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 RASSF6Q6ZTQ3 369 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 SLC16A9Q7RTY1 509 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 C11orf53Q8IXP5 236 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 OR1M1Q8NGA1 313 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 REEP6Q96HR9 211 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 TSSK6Q9BXA6 273 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 FAM107BQ9H098 131 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 MED4Q9NPJ6 270 aa14.22□□□□□ -0.13
TRIM56-203ENST00000467847 TIPRLO75663 272 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 CLPXO76031 633 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 CCNB2O95067 398 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 CLUP10909 449 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 SLC25A1P53007 311 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 PROK1P58294 105 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 CSNK2BP67870 215 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 IKZF1Q13422 519 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 EIF2B1Q14232 305 aaKnown RBP14.21□□□□□ -0.13
TRIM56-203ENST00000467847 TAF9Q16594 264 aa14.21□□□□□ -0.13
TRIM56-203ENST00000467847 ZNF770Q6IQ21 691 aaPredicted RBP14.21□□□□□ -0.13
TRIM56-203ENST00000467847 WDR82Q6UXN9 313 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms