RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-205ENST00000467663 HHLA2Q9UM44 414 aa10.41□□□□□ -0.74
CTNS-205ENST00000467663 NIPBLQ6KC79 2804 aaeCLIP10.4□□□□□ -0.74
CTNS-205ENST00000467663 TRAV1-2A0A0B4J238 106 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 TRBV5-5A0A0J9YX44 114 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 LOC100506127A0A0U1RQW1 187 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 PNMA8CA0A1B0GUJ8 204 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 M0R135 149 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 SMAD7O15105 426 aaKnown RBP10.4□□□□□ -0.74
CTNS-205ENST00000467663 SERPINA5P05154 406 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 TUBG1P23258 451 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 CFL1P23528 166 aaKnown RBP10.4□□□□□ -0.74
CTNS-205ENST00000467663 MYL9P24844 172 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 SOX6P35712 828 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 HTR5AP47898 357 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 CX3CR1P49238 355 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 MTNR1BP49286 362 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 PSMD7P51665 324 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 NANOS3P60323 173 aaKnown RBP10.4□□□□□ -0.74
CTNS-205ENST00000467663 RAB1AP62820 205 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 TNK1Q13470 666 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 DOC2BQ14184 412 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 CLEC12BQ2HXU8 276 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 PABPC1L2AQ5JQF8 200 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 C11orf71Q6IPW1 123 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 UNQ6126/PRO20091Q6UXV3 157 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 DNM1P46Q6ZS02 220 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 TMEM203Q969S6 136 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 ZNF799Q96GE5 643 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 PBOV1Q9GZY1 135 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 SLITRK2Q9H156 845 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 WNT5BQ9H1J7 359 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 DCSTAMPQ9H295 470 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 G6PC2Q9NQR9 355 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 TUBG2Q9NRH3 451 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 CBLN4Q9NTU7 201 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 B3GNT2Q9NY97 397 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 POU2F3Q9UKI9 436 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 GRIP1Q9Y3R0 1128 aa10.4□□□□□ -0.74
CTNS-205ENST00000467663 LOC390937A0A1W2PQ73 354 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 DHRS7CA6NNS2 312 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 MTRF1O75570 445 aaKnown RBP10.39□□□□□ -0.75
CTNS-205ENST00000467663 PNPP00491 289 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 IGHV4-39P01824 125 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 UCHL1P09936 223 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 CD79AP11912 226 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 CBR1P16152 277 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 CCL1P22362 96 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 ZNF121P58317 390 aaPredicted RBP10.39□□□□□ -0.75
CTNS-205ENST00000467663 VBP1P61758 197 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 RPS11P62280 158 aaKnown RBP eCLIP10.39□□□□□ -0.75
CTNS-205ENST00000467663 HIKESHIQ53FT3 197 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 ZMAT1Q5H9K5 638 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 SPATC1Q76KD6 591 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 DOK3Q7L591 496 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 CEACAM19Q7Z692 300 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 PRSS35Q8N3Z0 413 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 RPL3LQ92901 407 aaKnown RBP10.39□□□□□ -0.75
CTNS-205ENST00000467663 PDCD1LG2Q9BQ51 273 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 CENPOQ9BU64 300 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 OR10A2Q9H208 303 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 OPA3Q9H6K4 179 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 BARX1Q9HBU1 254 aaPredicted RBP10.39□□□□□ -0.75
CTNS-205ENST00000467663 ZNF224Q9NZL3 707 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 CCDC59Q9P031 241 aaKnown RBP10.39□□□□□ -0.75
CTNS-205ENST00000467663 SLC22A13Q9Y226 551 aa10.39□□□□□ -0.75
CTNS-205ENST00000467663 A0A096LPE4 126 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 A0A1B0GVI7 797 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 A0A1W2PPZ6 126 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 MEGF11A6BM72 1044 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 ANKRD61A6NGH8 418 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 F5H5K5 113 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 PDCD5O14737 125 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 XRCC2O43543 280 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 ICMTO60725 284 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 NDUFS7O75251 213 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 TTRP02766 147 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 ACSM4P0C7M7 580 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 OCM2P0CE71 109 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 APLNRP35414 380 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 KIR3DL2P43630 455 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 SLC6A9P48067 706 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 PRKXP51817 358 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 NCS1P62166 190 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 GALK2Q01415 458 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 DYNC1I2Q13409 638 aaKnown RBP10.38□□□□□ -0.75
CTNS-205ENST00000467663 OTPQ5XKR4 325 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 C22orf42Q6IC83 251 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 ZNF774Q6NX45 483 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 TMEM91Q6ZNR0 172 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 Q6ZSR3 168 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 PRSS45Q7RTY3 260 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 FBXL14Q8N1E6 418 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 MUC15Q8N387 334 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 DYNC2LI1Q8TCX1 351 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 PGAM5Q96HS1 289 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 C1QTNF5Q9BXJ0 243 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 CRNNQ9UBG3 495 aaPredicted RBP10.38□□□□□ -0.75
CTNS-205ENST00000467663 GTF2A1LQ9UNN4 478 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 DHDHQ9UQ10 334 aa10.38□□□□□ -0.75
CTNS-205ENST00000467663 NAV3Q8IVL0 2385 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms