RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PNPOQ9NVS9 261 aa8.17□□□□□ -1.1
HDAC3-203ENST00000467533 SLC25A37Q9NYZ2 338 aa8.17□□□□□ -1.1
HDAC3-203ENST00000467533 ZIM2Q9NZV7 527 aa8.17□□□□□ -1.1
HDAC3-203ENST00000467533 MRPL15Q9P015 296 aaKnown RBP8.17□□□□□ -1.1
HDAC3-203ENST00000467533 ZNF256Q9Y2P7 627 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-203ENST00000467533 COA3Q9Y2R0 106 aaPredicted RBP8.17□□□□□ -1.1
HDAC3-203ENST00000467533 TRAV27A0A087WT01 109 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 SLC16A7O60669 478 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 KHDRBS3O75525 346 aaKnown RBP8.16□□□□□ -1.1
HDAC3-203ENST00000467533 AZGP1P25311 298 aaKnown RBP8.16□□□□□ -1.1
HDAC3-203ENST00000467533 SDHAP31040 664 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 CEBPDP49716 269 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-203ENST00000467533 RPL23AP62750 156 aaKnown RBP8.16□□□□□ -1.1
HDAC3-203ENST00000467533 SELPLGQ14242 412 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 SSX2Q16385 188 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 WHAMMP3Q1A5X7 153 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 MESTQ5EB52 335 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 ATPAF1Q5TC12 328 aaPredicted RBP8.16□□□□□ -1.1
HDAC3-203ENST00000467533 CORO6Q6QEF8 472 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 ZNF788Q6ZQV5 615 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 C18orf65Q6ZTR6 163 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 WDR86Q86TI4 376 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 NAA40Q86UY6 237 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 MSRB3Q8IXL7 192 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 IFT20Q8IY31 132 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 LRRC75AQ8NAA5 344 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 KLHL30-AS1Q8NEE0 82 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 TMEM185AQ8NFB2 350 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 OR2AE1Q8NHA4 323 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 SLC26A7Q8TE54 656 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 CAPSLQ8WWF8 208 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 ZNF570Q96NI8 536 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 DUX3Q96PT4 197 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 P2RX4Q99571 388 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 HAO2Q9NYQ3 351 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 GRHPRQ9UBQ7 328 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 TBL2Q9Y4P3 447 aaKnown RBP8.16□□□□□ -1.1
HDAC3-203ENST00000467533 LHFPL6Q9Y693 200 aa8.16□□□□□ -1.1
HDAC3-203ENST00000467533 PRSS37A4D1T9 235 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 FAM90A8PA6NJQ4 464 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 H3BUI4 141 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 M0QX08 132 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 SIGLEC5O15389 551 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 SASH3O75995 380 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 ARG1P05089 322 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 IFI30P13284 250 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 CENPAP49450 140 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 ZNF92Q03936 586 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 TRAP1Q12931 704 aaKnown RBP8.15□□□□□ -1.1
HDAC3-203ENST00000467533 MEP1BQ16820 701 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 ZNF782Q6ZMW2 699 aaPredicted RBP8.15□□□□□ -1.1
HDAC3-203ENST00000467533 OR2W3Q7Z3T1 314 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 CPLX4Q7Z7G2 160 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 C11orf53Q8IXP5 236 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 OR1M1Q8NGA1 313 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 OR56B2PQ8NGI1 322 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 OR51A7Q8NH64 312 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 OR5K1Q8NHB7 308 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 AKR1E2Q96JD6 320 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 PITX2Q99697 317 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 ATF6BQ99941 703 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 SYT4Q9H2B2 425 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 IKZF5Q9H5V7 419 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 KCNK9Q9NPC2 374 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 HAO1Q9UJM8 370 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 CORO2BQ9UQ03 480 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 ADAM18Q9Y3Q7 739 aa8.15□□□□□ -1.1
HDAC3-203ENST00000467533 hCG_1809904A0A1W2PP81 198 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 A0A1W2PPE2 198 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 A0A1W2PPH5 198 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 A0A1W2PR64 198 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 A0A1W2PRV1 198 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 PSMB11A5LHX3 300 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 EVPLLA8MZ36 301 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 AHCYL1O43865 530 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 FRMD6-AS1P0C7T7 363 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 JUNBP17275 347 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-203ENST00000467533 SLC6A1P30531 599 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 GABRA2P47869 451 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 CAPZA1P52907 286 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 SLC25A1P53007 311 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 TPTEP56180 551 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 WDR4P57081 412 aaKnown RBP8.14□□□□□ -1.11
HDAC3-203ENST00000467533 ERVFRD-1P60508 538 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 HIST1H3AP68431 136 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 SLC34A1Q06495 639 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 MPP2Q14168 576 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 RSPO1Q2MKA7 263 aaPredicted RBP8.14□□□□□ -1.11
HDAC3-203ENST00000467533 SNAI3Q3KNW1 292 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 KRTAP27-1Q3LI81 207 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 ABCA11PQ4W5N1 156 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 LRIF1Q5T3J3 769 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 HIST2H3PS2Q5TEC6 136 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 CFAP77Q6ZQR2 320 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 HIST2H3AQ71DI3 136 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 OSR2Q8N2R0 312 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 C11orf65Q8NCR3 313 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 OR5M8Q8NGP6 311 aa8.14□□□□□ -1.11
HDAC3-203ENST00000467533 BPIFA2Q96DR5 249 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms