RNA–Protein interactions for RNA: ENST00000467318.5

DDX56-208, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,665 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-208ENST00000467318 KRTAP27-1Q3LI81 207 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 CDONQ4KMG0 1287 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 ZNF684Q5T5D7 378 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 PLET1Q6UQ28 207 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 DRAM2Q6UX65 266 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 MYPOPQ86VE0 399 aaPredicted RBP12.77□□□□□ -0.37
DDX56-208ENST00000467318 LRRC28Q86X40 367 aaPredicted RBP12.77□□□□□ -0.37
DDX56-208ENST00000467318 SYS1Q8N2H4 156 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 DUSP18Q8NEJ0 188 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 ZNF799Q96GE5 643 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 PLPPR2Q96GM1 343 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 NEDD4LQ96PU5 975 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 C11orf54Q9H0W9 315 aaPredicted RBP12.77□□□□□ -0.37
DDX56-208ENST00000467318 ELOVL3Q9HB03 270 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 RBFOX1Q9NWB1 397 aaKnown RBP12.77□□□□□ -0.37
DDX56-208ENST00000467318 SLCO1C1Q9NYB5 712 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 RABL2AQ9UBK7 228 aaPredicted RBP12.77□□□□□ -0.37
DDX56-208ENST00000467318 EIF3KQ9UBQ5 218 aaKnown RBP12.77□□□□□ -0.37
DDX56-208ENST00000467318 POU2F3Q9UKI9 436 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 RABL2BQ9UNT1 228 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 LRP12Q9Y561 859 aa12.77□□□□□ -0.37
DDX56-208ENST00000467318 ICE1Q9Y2F5 2266 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 IGHV2OR16-5A0A0B4J2B6 119 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 FAM172BPA6NC97 362 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 DEFB108AA8MXU0 73 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 FAM25AB3EWG3 89 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 FAM25CB3EWG5 89 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 FAM25GB3EWG6 89 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 PSMD9O00233 223 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 ICMTO60725 284 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 CCL2P13500 99 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 FAM220AQ7Z4H9 259 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 C1orf174Q8IYL3 243 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 HAVCR2Q8TDQ0 301 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
DDX56-208ENST00000467318 ISG20L2Q9H9L3 353 aaKnown RBP12.76□□□□□ -0.37
DDX56-208ENST00000467318 MRM2Q9UI43 246 aaKnown RBP12.76□□□□□ -0.37
DDX56-208ENST00000467318 HEATR1Q9H583 2144 aaKnown RBP12.76□□□□□ -0.37
DDX56-208ENST00000467318 USP9YO00507 2555 aaPredicted RBP12.75□□□□□ -0.37
DDX56-208ENST00000467318 PRR32B1ATL7 298 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 J3QW42 95 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 ABCD4O14678 606 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 RGS13O14921 159 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 TMEM127O75204 238 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 ABHD16AO95870 558 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 CD3EP07766 207 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 DBHP09172 617 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 COX6B1P14854 86 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 MRPL28Q13084 256 aaKnown RBP12.75□□□□□ -0.37
DDX56-208ENST00000467318 ZFP69Q49AA0 526 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 ATAD3CQ5T2N8 411 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 YIPF7Q8N8F6 280 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 ABHD4Q8TB40 342 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 PHYHIPQ92561 330 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 C4orf45Q96LM5 186 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 TTTY10Q9BZA0 68 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 GNG8Q9UK08 70 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 SPEF1Q9Y4P9 236 aa12.75□□□□□ -0.37
DDX56-208ENST00000467318 PLA2G10O15496 165 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 SSX4O60224 188 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 ACSM4P0C7M7 580 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 S100A1P23297 94 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 CALCRP30988 508 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 RAD52P43351 418 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 SLC6A9P48067 706 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 MMP16P51512 607 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 PRKXP51817 358 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 GBX2P52951 348 aaPredicted RBP12.74□□□□□ -0.37
DDX56-208ENST00000467318 UCP2P55851 309 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 CAV3P56539 151 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 RAB25P57735 213 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 OR12D2P58182 307 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 IDNKQ5T6J7 187 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 LIPNQ5VXI9 398 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 PAQR4Q8N4S7 273 aaPredicted RBP12.74□□□□□ -0.37
DDX56-208ENST00000467318 ZNF283Q8N7M2 679 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 C4orf36Q96KX1 117 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 BCL2L14Q9BZR8 327 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 CYSLTR2Q9NS75 346 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 N6AMT1Q9Y5N5 214 aa12.74□□□□□ -0.37
DDX56-208ENST00000467318 TRAV1-2A0A0B4J238 106 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 LINC00854A0A1B0GVQ3 168 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 FAM240BA0A1B0GVZ2 78 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 TMEM269A0A1B0GVZ9 245 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ANKRD61A6NGH8 418 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ACOD1A6NK06 481 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 A6NNC1 897 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 J3QLW9 94 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 MAGEB4O15481 346 aaPredicted RBP12.73□□□□□ -0.37
DDX56-208ENST00000467318 SIAH2O43255 324 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 LYRM1O43325 122 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 ZNF19P17023 458 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 TUBG1P23258 451 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 COL8A1P27658 744 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 CX3CR1P49238 355 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 PSMA6P60900 246 aaKnown RBP12.73□□□□□ -0.37
DDX56-208ENST00000467318 TP53I3Q53FA7 332 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 SLC22A25Q6T423 547 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 BAIAP2L2Q6UXY1 529 aa12.73□□□□□ -0.37
DDX56-208ENST00000467318 COLCA1Q6ZS62 124 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms