RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 CST4P01036 141 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 IGHV2-70P01814 119 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 ATP6V1B1P15313 513 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 CA6P23280 308 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 IL2RGP31785 369 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 PMELP40967 661 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 ACTC1P68032 377 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 ACTA1P68133 377 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF85Q03923 595 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF829Q3KNS6 432 aaPredicted RBP7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 C6orf52Q5T4I8 152 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF691Q5VV52 312 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 TTC23Q5W5X9 447 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 BHLHE23Q8NDY6 225 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 CLDND2Q8NHS1 167 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 APH1BQ8WW43 257 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 CCL17Q92583 94 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 RAB1CQ92928 201 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 RNFT2Q96EX2 444 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 Q96MT0 163 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 SOX7Q9BT81 388 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 PBOV1Q9GZY1 135 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 TMEM160Q9NX00 188 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 PPP1R3CQ9UQK1 317 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 WIPI2Q9Y4P8 454 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 PCDHGB1Q9Y5G3 927 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 NPTNQ9Y639 398 aa7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 SETD2Q9BYW2 2564 aaPredicted RBP7.99□□□□□ -1.13
SDCCAG3-208ENST00000466579 LOC100289279A0A1B0GTE1 492 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 METTL15A6NJ78 407 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 H0YAE9 185 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 TMEM178BH3BS89 294 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 PSMD9O00233 223 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 MAGEB4O15481 346 aaPredicted RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 WBP4O75554 376 aaKnown RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 IGHA1P01876 353 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 TTRP02766 147 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 HLA-DPB1P04440 258 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 DBTP11182 482 aaKnown RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 CCL1P22362 96 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ACKR3P25106 362 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 CDH15P55291 814 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 RIPPLY3P57055 190 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF91Q05481 1191 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 MFGE8Q08431 387 aaPredicted RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 MZT1Q08AG7 82 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 RAB40BQ12829 278 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 IL18R1Q13478 541 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR8G1Q15617 311 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 CDONQ4KMG0 1287 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 TMEM155Q4W5P6 130 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZBTB37Q5TC79 503 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 LIPNQ5VXI9 398 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 FDX2Q6P4F2 183 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 KCTD20Q7Z5Y7 419 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ELMOD2Q8IZ81 293 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 GALNT4Q8N4A0 578 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF555Q8NEP9 628 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 OR10H4Q8NGA5 316 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 MSI2Q96DH6 328 aaKnown RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 LGALS12Q96DT0 336 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 TIMD4Q96H15 378 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ZNF649Q9BS31 505 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ADAT1Q9BUB4 502 aaKnown RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 JAM3Q9BX67 310 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 ABCB9Q9NP78 766 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 BRD7Q9NPI1 651 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 DCAF16Q9NXF7 216 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 NKX1-2Q9UD57 310 aaPredicted RBP7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 AASSQ9UDR5 926 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 IKZF2Q9UKS7 526 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 N6AMT1Q9Y5N5 214 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 SNX5Q9Y5X3 404 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 HSPE1-MOB4S4R3N1 261 aa7.98□□□□□ -1.13
SDCCAG3-208ENST00000466579 SONP18583 2426 aaKnown RBP7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 A0A1B0GTI1 187 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 DHRS7CA6NNS2 312 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 ANKRD30BLA7E2S9 258 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 LOC110117498-PIK3R3F6TDL0 507 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 H0YJX3 145 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 APOL3O95236 402 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 IGHV2-5P01817 119 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 KRT8P05787 483 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 HOXB4P17483 251 aaPredicted RBP7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 CPT2P23786 658 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 ATP6V1E1P36543 226 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 SLC34A1Q06495 639 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 LRRC36Q1X8D7 754 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 FAM76BQ5HYJ3 339 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 PLEKHG7Q6ZR37 379 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 Q71RC1 249 aaPredicted RBP7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 PEG10Q86TG7 708 aaKnown RBP7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 MOGAT3Q86VF5 341 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 LRRC28Q86X40 367 aaPredicted RBP7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 CATSPERDQ86XM0 798 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 C11orf53Q8IXP5 236 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 FTMTQ8N4E7 242 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 DHRSXQ8N5I4 330 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 ACBD7Q8N6N7 88 aa7.97□□□□□ -1.13
SDCCAG3-208ENST00000466579 LINC01356Q8N9X3 169 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms