RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 ARF1P84077 181 aaKnown RBP11.84□□□□□ -0.51
UBE4B-206ENST00000466379 CHST4Q8NCG5 386 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 OR56B4Q8NH76 319 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 GPX8Q8TED1 209 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 CAPSLQ8WWF8 208 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 GPER1Q99527 375 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 NICN1Q9BSH3 213 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 MED28Q9H204 178 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 OR51J1Q9H342 316 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 BOLA1Q9Y3E2 137 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 OR6C6A6NF89 314 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 LCATP04180 440 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 CD3DP04234 171 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 CSF1P09603 554 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 RAB6AP20340 208 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 TNFSF10P50591 281 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 NOVA1P51513 510 aaKnown RBP11.84□□□□□ -0.51
UBE4B-206ENST00000466379 UBE2V2Q15819 145 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 TMEM104Q8NE00 496 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 OR11H7Q8NGC8 314 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 SVIPQ8NHG7 77 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 OR10A2Q9H208 303 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 BANF2Q9H503 90 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 EMC3Q9P0I2 261 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 TIMM10BQ9Y5J6 103 aa11.84□□□□□ -0.51
UBE4B-206ENST00000466379 ZNF292O60281 2723 aa11.83□□□□□ -0.51
UBE4B-206ENST00000466379 RAB27BO00194 218 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 HPXP02790 462 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 DRAM2Q6UX65 266 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF782Q6ZMW2 699 aaPredicted RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 NUFIP2Q7Z417 695 aaKnown RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 TMEM178AQ8NBL3 297 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 PIGTQ969N2 578 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 PTX4Q96A99 478 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 C1orf147Q96MC9 270 aaPredicted RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 NOX3Q9HBY0 568 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 ACKR4Q9NPB9 350 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 CFAP47Q6ZTR5 3102 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 ZFHX2Q9C0A1 2572 aaPredicted RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 A0A0A6YYD4 124 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 TRGV5A0A0B4J1U4 118 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 METTL21EPA6NDL7 271 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 TMEM14DPA8MWL7 114 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 MPIG6BO95866 241 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 APOC1P02654 83 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 LPLP06858 475 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 MMP7P09237 267 aaPredicted RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 ANXA7P20073 488 aaKnown RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 ACKR3P25106 362 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 STOMP27105 288 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 THBS4P35443 961 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 RAD52P43351 418 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 SOX8P57073 446 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 MRPS15P82914 257 aaKnown RBP11.83□□□□□ -0.52
UBE4B-206ENST00000466379 CRIP3Q6Q6R5 217 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 Q6ZTK2 550 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 CHMP1BQ7LBR1 199 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 NOXA1Q86UR1 476 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 TCTE3Q8IZS6 198 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 REEP6Q96HR9 211 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 ING3Q9NXR8 418 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 KLK13Q9UKR3 277 aa11.83□□□□□ -0.52
UBE4B-206ENST00000466379 WISP2O76076 250 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 TGM6O95932 706 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 ACTL6AO96019 429 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 GNB3P16520 340 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 CXCL3P19876 107 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 DEFB109BQ30KR1 87 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF260Q3ZCT1 412 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 PABPC1L2AQ5JQF8 200 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 C1QL2Q7Z5L3 287 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 SSC4DQ8WTU2 575 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 WDYHV1Q96HA8 205 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 SEC22CQ9BRL7 303 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 C12orf49Q9H741 205 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 PLSCR3Q9NRY6 295 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 GPR173Q9NS66 373 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF224Q9NZL3 707 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF222Q9UK12 451 aa11.82□□□□□ -0.52
UBE4B-206ENST00000466379 ZNF503-AS2A6NEH8 195 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 M0QYG6 137 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 NDUFB6O95139 128 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 FARS2O95363 451 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 YES1P07947 543 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 AKAIN1P0CW23 69 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 IFITM2Q01629 132 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 FAPQ12884 760 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 ECH1Q13011 328 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 KISS1Q15726 138 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 BCL2A1Q16548 175 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 CDNFQ49AH0 187 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 SLC22A6Q4U2R8 563 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 STEAP1BQ6NZ63 245 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 MCEMP1Q8IX19 187 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 GABRG1Q8N1C3 465 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 CPEB3Q8NE35 698 aaKnown RBP11.81□□□□□ -0.52
UBE4B-206ENST00000466379 OR52H1Q8NGJ2 320 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 OR51S1Q8NGJ8 323 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 NUDCD2Q8WVJ2 157 aa11.81□□□□□ -0.52
UBE4B-206ENST00000466379 AQP3Q92482 292 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms