RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 FGF23Q9GZV9 251 aaPredicted RBP16.98■□□□□ 0.31
COL6A1-203ENST00000466285 MED20Q9H944 212 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 CENPMQ9NSP4 180 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 ARMC1Q9NVT9 282 aa16.98■□□□□ 0.31
COL6A1-203ENST00000466285 CLPSL1A2RUU4 121 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 GASTP01350 101 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 SPI1P17947 270 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 ENTPD1P49961 510 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 WDR38Q5JTN6 314 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 LINC01590Q5TEZ4 76 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 METTL11BQ5VVY1 283 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 HIST2H2BDQ6DRA6 164 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 CYP2R1Q6VVX0 501 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 C17orf107Q6ZR85 190 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 SLC16A9Q7RTY1 509 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 VMO1Q7Z5L0 202 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 PGAM4Q8N0Y7 254 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 PNKDQ8N490 385 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 OR2T4Q8NH00 348 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 LRRC29Q8WV35 223 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 GATAD2BQ8WXI9 593 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 SPSB4Q96A44 273 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 CDRT15Q96T59 188 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 KCNJ15Q99712 375 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 BEX1Q9HBH7 125 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 TBC1D23Q9NUY8 699 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 DNAJB11Q9UBS4 358 aa16.97■□□□□ 0.31
COL6A1-203ENST00000466285 RPUSD1Q9UJJ7 312 aaKnown RBP16.97■□□□□ 0.31
COL6A1-203ENST00000466285 TRAV38-1A0A0B4J264 116 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 DHRS12A0PJE2 317 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 TBX1O43435 398 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 TSPAN15O95858 294 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 CX3CR1P49238 355 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 FAM3AP98173 230 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 KLRD1Q13241 179 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 TAF9Q16594 264 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 CD276Q5ZPR3 534 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 ASPHD2Q6ICH7 369 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 WDR82Q6UXN9 313 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 PRSS45Q7RTY3 260 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 TMEM86BQ8N661 226 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 OR52L1Q8NGH7 329 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 LINC01006Q8NI28 216 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 MCUR1Q96AQ8 359 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 SLC22A4Q9H015 551 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 IL20Q9NYY1 176 aa16.96■□□□□ 0.31
COL6A1-203ENST00000466285 hCG_38984A0A1B0GV85 526 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 A0A1W2PRD5 423 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 A0A1W2PRF3 423 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 A0A1W2PRM7 423 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 ZNF593O00488 134 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-203ENST00000466285 ACOT8O14734 319 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 SNX3O60493 162 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 GMNNO75496 209 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 LDLRAD3Q86YD5 345 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 AQP11Q8NBQ7 271 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 PLPP7Q8NBV4 271 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 OR6K6Q8NGW6 343 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 SSMEM1Q8WWF3 244 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 SGK3Q96BR1 496 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 FAM71F1Q96KD3 344 aaPredicted RBP16.95■□□□□ 0.3
COL6A1-203ENST00000466285 TSSK6Q9BXA6 273 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 SIRT7Q9NRC8 400 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 TAS2R1Q9NYW7 299 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 DNAJC27Q9NZQ0 273 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 POMT1Q9Y6A1 747 aa16.95■□□□□ 0.3
COL6A1-203ENST00000466285 TCRBV5S2A0A599 114 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 FAM183AA6NL82 134 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 ZNF878C9JN71 531 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 TNFRSF11BO00300 401 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 IFNGR2P38484 337 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 IER3P46695 156 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 PROK1P58294 105 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 BPIFB3P59826 476 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 GMFBP60983 142 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 GFOD2Q3B7J2 385 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 SAMD4BQ5PRF9 694 aaKnown RBP16.94■□□□□ 0.3
COL6A1-203ENST00000466285 Q6ZSV7 163 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 RASSF6Q6ZTQ3 369 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 IQCF1Q8N6M8 205 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 PNLDC1Q8NA58 520 aaKnown RBP16.94■□□□□ 0.3
COL6A1-203ENST00000466285 OR1M1Q8NGA1 313 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 REEP6Q96HR9 211 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 CCT8L2Q96SF2 557 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 ONECUT1Q9UBC0 465 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 KAAG1Q9UBP8 84 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 RNF114Q9Y508 228 aa16.94■□□□□ 0.3
COL6A1-203ENST00000466285 RNASEK-C17orf49H0YIS7 233 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 CRYBA1P05813 215 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 ANXA2P07355 339 aaKnown RBP16.93■□□□□ 0.3
COL6A1-203ENST00000466285 MAGEA2P43356 314 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 HMGA2P52926 109 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 EIF2B1Q14232 305 aaKnown RBP16.93■□□□□ 0.3
COL6A1-203ENST00000466285 PDCD1Q15116 288 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 KCNJ8Q15842 424 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 FAM57BQ71RH2 274 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 DEFB107AQ8IZN7 70 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 Q8N7P7 452 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 SCCPDHQ8NBX0 429 aa16.93■□□□□ 0.3
COL6A1-203ENST00000466285 LY6G5BQ8NDX9 201 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms