RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 JAM3Q9BX67 310 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 MYRFQ9Y2G1 1151 aa17.2■□□□□ 0.34
SKA3-205ENST00000465471 IGHV4-61A0A0C4DH41 118 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 DAPL1A0PJW8 107 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 F5H5P2 479 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 LOC110117498-PIK3R3F6TDL0 507 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 SMAD7O15105 426 aaKnown RBP17.19■□□□□ 0.34
SKA3-205ENST00000465471 GMDSO60547 372 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 FAM20BO75063 409 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 PTBP3O95758 552 aaKnown RBP17.19■□□□□ 0.34
SKA3-205ENST00000465471 FADS2O95864 444 aaKnown RBP17.19■□□□□ 0.34
SKA3-205ENST00000465471 TNFRSF1AP19438 455 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 CA6P23280 308 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 ACKR3P25106 362 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 CD200P41217 278 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 KRTAP1-1Q07627 177 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 LAIR2Q6ISS4 152 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 BIVMQ86UB2 503 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 CATSPERDQ86XM0 798 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 ELMOD2Q8IZ81 293 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 C8orf59Q8N0T1 100 aaPredicted RBP17.19■□□□□ 0.34
SKA3-205ENST00000465471 CELF2-AS1Q8N7Q2 184 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 MAPK1IP1LQ8NDC0 245 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 OR52I1Q8NGK6 324 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 RORBQ92753 470 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 PPP1R14AQ96A00 147 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 INPP5EQ9NRR6 644 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 NOP16Q9Y3C1 178 aaKnown RBP17.19■□□□□ 0.34
SKA3-205ENST00000465471 SNX5Q9Y5X3 404 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 DYSFO75923 2080 aa17.19■□□□□ 0.34
SKA3-205ENST00000465471 USF1P22415 310 aaPredicted RBP17.18■□□□□ 0.34
SKA3-205ENST00000465471 GATA4P43694 442 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 SRP9P49458 86 aaKnown RBP17.18■□□□□ 0.34
SKA3-205ENST00000465471 MAB21L1Q13394 359 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 HFEQ30201 348 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 TP53I3Q53FA7 332 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 KLHL22Q53GT1 634 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 Q6ZSR3 168 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 KCTD20Q7Z5Y7 419 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 KLBQ86Z14 1044 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 EGFL6Q8IUX8 553 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 CSNK2A3Q8NEV1 391 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 SMR3AQ99954 134 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 ADAT1Q9BUB4 502 aaKnown RBP17.18■□□□□ 0.34
SKA3-205ENST00000465471 GCM1Q9NP62 436 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 FGF20Q9NP95 211 aaPredicted RBP17.18■□□□□ 0.34
SKA3-205ENST00000465471 ACOXLQ9NUZ1 547 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 OR52A1Q9UKL2 312 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 CSPG4Q6UVK1 2322 aa17.18■□□□□ 0.34
SKA3-205ENST00000465471 TLN2Q9Y4G6 2542 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 RPP14O95059 124 aaKnown RBP17.17■□□□□ 0.34
SKA3-205ENST00000465471 ATP6V1B1P15313 513 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 GPR6P46095 362 aaPredicted RBP17.17■□□□□ 0.34
SKA3-205ENST00000465471 GALEQ14376 348 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 OR8G1Q15617 311 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 BCL2L15Q5TBC7 163 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 PLPP7Q8NBV4 271 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 OR51E1Q8TCB6 317 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 VCX3BQ9H321 246 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 GPR84Q9NQS5 396 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 ERVK13-1Q9NX77 482 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 GNG8Q9UK08 70 aa17.17■□□□□ 0.34
SKA3-205ENST00000465471 ABCA2Q9BZC7 2435 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 A0A1B0GTI1 187 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 ANKRD30BLA7E2S9 258 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 CST4P01036 141 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 CCL1P22362 96 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 OR12D2P58182 307 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 ACTA2P62736 377 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 ACTG2P63267 376 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 SNCBQ16143 134 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 C6orf52Q5T4I8 152 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 FDX2Q6P4F2 183 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 FAM220AQ7Z4H9 259 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 THAP5Q7Z6K1 395 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 SYS1Q8N2H4 156 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 CCL17Q92583 94 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 DVL3Q92997 716 aaPredicted RBP17.16■□□□□ 0.34
SKA3-205ENST00000465471 ALG8Q9BVK2 526 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 TMEM106BQ9NUM4 274 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 DCAF16Q9NXF7 216 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 PPP1R3CQ9UQK1 317 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 SLC22A13Q9Y226 551 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 RHBDD3Q9Y3P4 386 aa17.16■□□□□ 0.34
SKA3-205ENST00000465471 CLDN25C9JDP6 229 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 PPIHO43447 177 aaKnown RBP17.15■□□□□ 0.34
SKA3-205ENST00000465471 LIMS3P0CW19 117 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 LIMS4P0CW20 117 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 SLC3A1Q07837 685 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 HNRNPA0Q13151 305 aaKnown RBP17.15■□□□□ 0.34
SKA3-205ENST00000465471 ZNF181Q2M3W8 571 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 TMEM249Q2WGJ8 235 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 WDR38Q5JTN6 314 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 LHFPL3Q86UP9 236 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 PRSS35Q8N3Z0 413 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 SPERTQ8NA61 448 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 Q8TCH9 128 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 PELI1Q96FA3 418 aa17.15■□□□□ 0.34
SKA3-205ENST00000465471 GSX1Q9H4S2 264 aaPredicted RBP17.15■□□□□ 0.34
SKA3-205ENST00000465471 PLCXD1Q9NUJ7 323 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms