RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 LOC400499M0QZD8 3231 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 CACNA1CQ13936 2221 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 RIF1Q5UIP0 2472 aaKnown RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 METTL21EPA6NDL7 271 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 WIPF3A6NGB9 483 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 SPDEFO95238 335 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 OPN1LWP04000 364 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ATF4P18848 351 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 TBPP20226 339 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 EIF1P41567 113 aaKnown RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 MELKQ14680 651 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 TGIF1Q15583 401 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 MOGAT2Q3SYC2 334 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 OTPQ5XKR4 325 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF529Q6P280 563 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF813Q6ZN06 617 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 H1FNTQ75WM6 255 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 LYG2Q86SG7 212 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF584Q8IVC4 421 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 GTPBP8Q8N3Z3 284 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 OR52H1Q8NGJ2 320 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 MITD1Q8WV92 249 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 RNF133Q8WVZ7 376 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 JSRP1Q96MG2 331 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 FOXN4Q96NZ1 517 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 KCNK17Q96T54 332 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 UQCC2Q9BRT2 126 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 CHST11Q9NPF2 352 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 FANCFQ9NPI8 374 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ASCL3Q9NQ33 180 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 C12orf4Q9NQ89 552 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 SERINC1Q9NRX5 453 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 ALKBH4Q9NXW9 302 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 GTF2A1LQ9UNN4 478 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 VSIG4Q9Y279 399 aa11□□□□□ -0.65
COL4A6-204ENST00000461897 RPH3AQ9Y2J0 694 aaPredicted RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 CNOT1A5YKK6 2376 aaKnown RBP11□□□□□ -0.65
COL4A6-204ENST00000461897 NCKAP5O14513 1909 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 A0A087WZY1 265 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 RNF222A6NCQ9 220 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 LGALS8O00214 317 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 TSPAN4O14817 238 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 BPNT1O95861 308 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 DAP3P51398 398 aaKnown RBP10.99□□□□□ -0.65
COL4A6-204ENST00000461897 DSCR4P56555 118 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-204ENST00000461897 GPR85P60893 370 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 LIN54Q6MZP7 749 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 CORO6Q6QEF8 472 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 ACOT7LQ6ZUV0 252 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 TMED4Q7Z7H5 227 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 OR4D6Q8NGJ1 314 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 MRGPRFQ96AM1 343 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 WDR13Q9H1Z4 485 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 KLHL13Q9P2N7 655 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF230Q9UIE0 474 aaPredicted RBP10.99□□□□□ -0.65
COL4A6-204ENST00000461897 ZFHX4Q86UP3 3567 aa10.99□□□□□ -0.65
COL4A6-204ENST00000461897 A0A1W2PNR3 127 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 KANTRA0A1W2PQU2 76 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 DCDC2BA2VCK2 349 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM235A6NFC5 223 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 MPTX1A8MV57 137 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 TOR1AO14656 332 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 TM4SF5O14894 197 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 ZIC3O60481 467 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 F10P00742 488 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 P04436 131 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF823P16415 610 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 CD82P27701 267 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 SFTPDP35247 375 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 CYB561P49447 251 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 TLE3Q04726 772 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 SPOCK1Q08629 439 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 WDFY1Q8IWB7 410 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 PAQR4Q8N4S7 273 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 JAGN1Q8N5M9 183 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 ZNF248Q8NDW4 579 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 SLC25A43Q8WUT9 341 aaPredicted RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 OR5B2Q96R09 309 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 DEPPQ9NTK1 212 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 FAM206AQ9NX38 181 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 B3GAT1Q9P2W7 334 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 MED13Q9UHV7 2174 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 ANAPC10Q9UM13 185 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 B3GALT5Q9Y2C3 310 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 FREM3P0C091 2139 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 TMEM269A0A1B0GVZ9 245 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 A0A1W2PNV4 684 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 LRRC3CA6NJW4 275 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 EIF1AYO14602 144 aaKnown RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 MPZL1O95297 269 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 HLA-AP01891 365 aaKnown RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 BDKRB2P30411 391 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 EIF1AXP47813 144 aaKnown RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 P2RY4P51582 365 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 RNASE10Q5GAN6 216 aaKnown RBP10.98□□□□□ -0.65
COL4A6-204ENST00000461897 ATP1A1-AS1Q5TC04 95 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 RAET1LQ5VY80 246 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 UQCC3Q6UW78 93 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 DCXRQ7Z4W1 244 aa10.98□□□□□ -0.65
COL4A6-204ENST00000461897 FJX1Q86VR8 437 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms