RNA–Protein interactions for RNA: ENST00000460408.5

RFC4-211, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-211ENST00000460408 STXBP1P61764 594 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 RAP1AP62834 184 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 PRR3P79522 188 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 LOXL1Q08397 574 aaPredicted RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 SLC39A6Q13433 755 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 SF3A2Q15428 464 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 LINC00483Q53H64 154 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 THEM4Q5T1C6 240 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 PLET1Q6UQ28 207 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 TMEM205Q6UW68 189 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 BZW1Q7L1Q6 419 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 TMEM150AQ86TG1 271 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 WDR86Q86TI4 376 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 NPWQ8N729 165 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 TMEM105Q8N8V8 129 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 FAM81AQ8TBF8 368 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 TSEN15Q8WW01 171 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 PDXPQ96GD0 296 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 SYNDIG1Q9H7V2 258 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 NTN4Q9HB63 628 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 CCDC59Q9P031 241 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 YTHDF2Q9Y5A9 579 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 VPS13AQ96RL7 3174 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 DSPP15924 2871 aaKnown RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 PHIPQ8WWQ0 1821 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 ABCA2Q9BZC7 2435 aa1.98□□□□□ -2.09
RFC4-211ENST00000460408 UBR5O95071 2799 aaPredicted RBP1.98□□□□□ -2.09
RFC4-211ENST00000460408 LRRK2Q5S007 2527 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 PCNX1Q96RV3 2341 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 ZZEF1O43149 2961 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 ITPR1Q14643 2758 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 NCBP2LA6PVI3 153 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 LYRM9A8MSI8 78 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 LSM1O15116 133 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 ZNF207O43670 478 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 HUS1O60921 280 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 GCM2O75603 506 aaPredicted RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 CTAG2O75638 210 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 UBTFL6P0CB48 400 aaPredicted RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 PSMC3P17980 439 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 ATF6P18850 670 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 BCKDHBP21953 392 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 STOMP27105 288 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 CEACAM3P40198 252 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 SYKP43405 635 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 MRPL19P49406 292 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 ARG2P78540 354 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 GBE1Q04446 702 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 MERTKQ12866 999 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 MOBPQ13875 183 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 RGNQ15493 299 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 N4BP2L1Q5TBK1 243 aaPredicted RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 FAM71E1Q6IPT2 247 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 IGFL3Q6UXB1 125 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 MBOAT1Q6ZNC8 495 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 CMC1Q7Z7K0 106 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 CBLN2Q8IUK8 224 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 PQLC3Q8N755 202 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 CCDC148Q8NFR7 591 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 OR10AD1Q8NGE0 317 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 LYPD6BQ8NI32 183 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 PHOSPHO2Q8TCD6 241 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 C15orf40Q8WUR7 153 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 C8orf44Q96CB5 159 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 TM4SF18Q96CE8 201 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 DNAJC1Q96KC8 554 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 LZTS2Q9BRK4 669 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 NDFIP1Q9BT67 221 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 LCE3DQ9BYE3 92 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 ANKRD60Q9BZ19 345 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 VPS37BQ9H9H4 285 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 RETNQ9HD89 108 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 TMEM9BQ9NQ34 198 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 SAMSN1Q9NSI8 373 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 LYARQ9NX58 379 aaKnown RBP1.97□□□□□ -2.09
RFC4-211ENST00000460408 GCNT4Q9P109 453 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 TRIOO75962 3097 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 CHD9Q3L8U1 2897 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 MUC19Q7Z5P9 8384 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 TENM4Q6N022 2769 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 MYO10Q9HD67 2058 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 LRRC37AA6NMS7 1700 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 RALGAPA2Q2PPJ7 1873 aa1.97□□□□□ -2.09
RFC4-211ENST00000460408 KALRNO60229 2985 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 OTOFQ9HC10 1997 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 IGKV2-28A0A075B6P5 120 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 A0A0U1RQV1 116 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 A0A1B0GW55 424 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 A0A1W2PP18 115 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 CACNG3O60359 315 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 FLOT1O75955 427 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 SLC25A14O95258 325 aaPredicted RBP1.96□□□□□ -2.1
RFC4-211ENST00000460408 IGKV2D-28P01615 120 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 ARG1P05089 322 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 MRPL3P09001 348 aaKnown RBP1.96□□□□□ -2.1
RFC4-211ENST00000460408 CD3GP09693 182 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 CISD3P0C7P0 127 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 DUX4L2P0CJ85 424 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 DUX4L3P0CJ86 424 aa1.96□□□□□ -2.1
RFC4-211ENST00000460408 DUX4L5P0CJ88 424 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms