RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 C11orf72Q8NBR9 251 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 INO80EQ8NBZ0 244 aaPredicted RBP3.38□□□□□ -1.87
CCDC50-203ENST00000460064 OR13C9Q8NGT0 318 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 OR2L8Q8NGY9 312 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 C15orf40Q8WUR7 153 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 RGP1Q92546 391 aaPredicted RBP3.38□□□□□ -1.87
CCDC50-203ENST00000460064 TCEAL3Q969E4 200 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 DCPSQ96C86 337 aaKnown RBP3.38□□□□□ -1.87
CCDC50-203ENST00000460064 CHMP6Q96FZ7 201 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 RNF145Q96MT1 663 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF382Q96SR6 550 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 CALN1Q9BXU9 219 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 PARD6GQ9BYG4 376 aaPredicted RBP3.38□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF355PQ9NSJ1 428 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 MS4A12Q9NXJ0 267 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 ZNRD1Q9P1U0 126 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 POFUT2Q9Y2G5 429 aa3.38□□□□□ -1.87
CCDC50-203ENST00000460064 ADAMTS13Q76LX8 1427 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 A0A1W2PNU3 283 aaPredicted RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 GOLGA8MH3BSY2 632 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 B4GALT5O43286 388 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF189O75820 626 aaPredicted RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 SEMA3DO95025 777 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 IGFBP3P17936 291 aaPredicted RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 TCP1P17987 556 aaKnown RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ATP5J2P56134 94 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ARPC4P59998 168 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 PRR3P79522 188 aaKnown RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF33AQ06730 810 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 FADDQ13158 208 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 EBI3Q14213 229 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 KIR2DS1Q14954 304 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 MAPRE2Q15555 327 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 CDKL4Q5MAI5 379 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 C6orf183Q5T699 404 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF470Q6ECI4 717 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 FAM71E1Q6IPT2 247 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ADNP2Q6IQ32 1131 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM205Q6UW68 189 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 Q6ZR03 302 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 NTM-AS1Q6ZSK4 140 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 CALHM1Q8IU99 346 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 ST13P4Q8IZP2 240 aaPredicted RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 CMTM8Q8IZV2 173 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 OR7G1Q8NGA0 311 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 OR8J2Q8NGG1 315 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 OR51F2Q8NH61 342 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 UBALD1Q8TB05 177 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 SYNPRQ8TBG9 265 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 RPEQ96AT9 228 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 APH1AQ96BI3 265 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 CERS2Q96G23 380 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 CAMK2N2Q96S95 79 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 HSD17B10Q99714 261 aaKnown RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM175Q9BSA9 504 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 HINT2Q9BX68 163 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 NDEL1Q9GZM8 345 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 RAB1BQ9H0U4 201 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 CSNK1G1Q9HCP0 422 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 MYOZ1Q9NP98 299 aaPredicted RBP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 MCUBQ9NWR8 336 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 IL37Q9NZH6 218 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 PRO0461Q9UI25 63 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 SCML1Q9UN30 329 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 PUS1Q9Y606 427 aaKnown RBP eCLIP3.37□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM14AQ9Y6G1 99 aa3.37□□□□□ -1.87
CCDC50-203ENST00000460064 TRAV19A0A0A6YYK7 116 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 A0A0J9YXV3 536 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 C1orf232A0A0U1RR37 186 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 TMEM210A6NLX4 147 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 OR5K4A6NMS3 321 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 GOLGA8RI6L899 631 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ZBTB5O15062 677 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 SIVA1O15304 175 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 RAD51BO15315 384 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 XRCC2O43543 280 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ZNF324O75467 553 aaPredicted RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 OR56A5P0C7T3 313 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 CD82P27701 267 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 PSMB6P28072 239 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 CD40LGP29965 261 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 KCNJ3P48549 501 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 SYNJ2BPP57105 145 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 POLR2GP62487 172 aaKnown RBP eCLIP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 SYCNQ0VAF6 134 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 PMS2P3Q13401 168 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 SNCBQ16143 134 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 RGS21Q2M5E4 152 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 GCSAMLQ5JQS6 135 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 CLVS2Q5SYC1 327 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 AVPI1Q5T686 147 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 FBXW9Q5XUX1 488 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ASCL4Q6XD76 172 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 USP50Q70EL3 339 aaPredicted RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 SNX20Q7Z614 316 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 CYP4Z1Q86W10 505 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 RBM45Q8IUH3 476 aaKnown RBP3.36□□□□□ -1.87
CCDC50-203ENST00000460064 ARRDC1Q8N5I2 433 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 GATSQ8NAP1 163 aa3.36□□□□□ -1.87
CCDC50-203ENST00000460064 PROKR2Q8NFJ6 384 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms