RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 NPRL2Q8WTW4 380 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 GTF3AQ92664 365 aaKnown RBP7.53□□□□□ -1.2
RIF1-208ENST00000457745 REEP6Q96HR9 211 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 MOB1AQ9H8S9 216 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 GPR173Q9NS66 373 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 OR5V1Q9UGF6 321 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 GSTK1Q9Y2Q3 226 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 HIVEP3Q5T1R4 2406 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 ZFYVE26Q68DK2 2539 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 NBEAQ8NFP9 2946 aa7.53□□□□□ -1.2
RIF1-208ENST00000457745 A0A0U1RQV5 110 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 A0A1W2PP11 408 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 NKX2-6A6NCS4 301 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 NOTOA8MTQ0 251 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 SMPD2O60906 423 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 C1QL1O75973 258 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 CNOT4O95628 575 aaKnown RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 SERPINA3P01011 423 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 IGKV3-15P01624 115 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 SERPINA5P05154 406 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 RNF224P0DH78 156 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 COX5BP10606 129 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 CBR1P16152 277 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ELK1P19419 428 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 GNLYP22749 145 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 MYL9P24844 172 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 OPRM1P35372 400 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ARR3P36575 388 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 MPV17P39210 176 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 GSK3AP49840 483 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ZNF83P51522 516 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ECH1Q13011 328 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 GK2Q14410 553 aaPredicted RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 EIF2S3LQ2VIR3 472 aaKnown RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 OR10K2Q6IF99 312 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ALKBH2Q6NS38 261 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 DOK3Q7L591 496 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 C1QL2Q7Z5L3 287 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 COMMD2Q86X83 199 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 IZUMO1Q8IYV9 350 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 C1orf162Q8NEQ5 155 aaPredicted RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 SLC30A7Q8NEW0 376 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 OR1M1Q8NGA1 313 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 UBASH3BQ8TF42 649 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 SPTSSAQ969W0 71 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 SPSB4Q96A44 273 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 RFT1Q96AA3 541 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 C1orf147Q96MC9 270 aaPredicted RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 ZFP3Q96NJ6 502 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 VKORC1Q9BQB6 163 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ZNF581Q9P0T4 197 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 MYEF2Q9P2K5 600 aaKnown RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 CRNNQ9UBG3 495 aaPredicted RBP7.52□□□□□ -1.21
RIF1-208ENST00000457745 COMMD3Q9UBI1 195 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 GPR160Q9UJ42 338 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 ESPL1Q14674 2120 aa7.52□□□□□ -1.21
RIF1-208ENST00000457745 IGHV2OR16-5A0A0B4J2B6 119 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 IFITM5A6NNB3 132 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 FAM90A27PA6NNH2 459 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 CCL21O00585 134 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 MSTNO14793 375 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 ARL6IP5O75915 188 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 KDM4BO94953 1096 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 HOXD4P09016 255 aaPredicted RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 PTHLHP12272 177 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 ZNF35P13682 527 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 PSMB1P20618 241 aaKnown RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 AZGP1P25311 298 aaKnown RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 OR3A4PP47883 348 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 MMP15P51511 669 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 UBE2NP61088 152 aaKnown RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 HOXA4Q00056 320 aaPredicted RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 P2RY6Q15077 328 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 OR8B8Q15620 311 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 MOGQ16653 247 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 TMEM42Q69YG0 159 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 CNIH2Q6PI25 160 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 BEND4Q6ZU67 534 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 FJX1Q86VR8 437 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 TPRA1Q86W33 373 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 OR4M1Q8NGD0 313 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 OR56B2PQ8NGI1 322 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 TRMT10AQ8TBZ6 339 aaKnown RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 HAVCR2Q8TDQ0 301 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 HPSE2Q8WWQ2 592 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 GCDHQ92947 438 aaPredicted RBP7.51□□□□□ -1.21
RIF1-208ENST00000457745 PIGTQ969N2 578 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 WBP1Q96G27 269 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 SOSTQ9BQB4 213 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 ACTR6Q9GZN1 396 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 OR10A2Q9H208 303 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 MMP27Q9H306 513 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 ATPIF1Q9UII2 106 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 FZR1Q9UM11 496 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 PIGLQ9Y2B2 252 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 CMAHPQ9Y471 501 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 A3GALT2U3KPV4 340 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 V9GY05 133 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 HCFC1P51610 2035 aa7.51□□□□□ -1.21
RIF1-208ENST00000457745 DIDO1Q9BTC0 2240 aaKnown RBP7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms