RNA–Protein interactions for RNA: ENST00000457642.1

HMGN1P18-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 18, humanhuman

BASIC

Gene HMGN1P18, Length 277 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P18-201ENST00000457642 FAM71F1Q96KD3 344 aaPredicted RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 OXGR1Q96P68 337 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 AQP10Q96PS8 301 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 OCSTAMPQ9BR26 566 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 TCEAL7Q9BRU2 100 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 NAA11Q9BSU3 229 aaPredicted RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 PBDC1Q9BVG4 233 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 TGIF2Q9GZN2 237 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 VN1R1Q9GZP7 353 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 METTL9Q9H1A3 318 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 LPAR5Q9H1C0 372 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 PLEKHA2Q9HB19 425 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 ELL3Q9HB65 397 aaPredicted RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 TAF9BQ9HBM6 251 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 FANCFQ9NPI8 374 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 OR2S2Q9NQN1 319 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 PARP11Q9NR21 331 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 SMCO4Q9NRQ5 59 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 FAM212BQ9NTI7 297 aaPredicted RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 TMEM100Q9NV29 134 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 UQCC1Q9NVA1 299 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 EHFQ9NZC4 300 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 GSKIPQ9P0R6 139 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 LUZP4Q9P127 313 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 MYEF2Q9P2K5 600 aaKnown RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 DHCR7Q9UBM7 475 aaKnown RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 LPAR3Q9UBY5 353 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 EDARQ9UNE0 448 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 GPR132Q9UNW8 380 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 VDAC3Q9Y277 283 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 MRPS17Q9Y2R5 130 aaKnown RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 KCNIP3Q9Y2W7 256 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 HDGFL3Q9Y3E1 203 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 STRAPQ9Y3F4 350 aaKnown RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 PCDHGA1Q9Y5H4 931 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 KIF26BQ2KJY2 2108 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 KIAA0100Q14667 2235 aaKnown RBP2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 DNAH12Q6ZR08 3092 aa2.96□□□□□ -1.94
HMGN1P18-201ENST00000457642 SPTBP11277 2137 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CPAMD8Q8IZJ3 1885 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CACNA1CQ13936 2221 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 EML5Q05BV3 1969 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 IGHV1OR21-1A0A087WYE8 117 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 IGLV3-32A0A0A0MS00 114 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 IGHV1OR15-9A0A0B4J2B8 117 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 A0A0U1RQV5 110 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 A0A1W2PR77 199 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 PQLC2LA1A4F0 135 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 PCP4L1A6NKN8 68 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 GJE1A6NN92 205 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 METTL12A8MUP2 240 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 C10orf142B7Z368 130 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 E5RGE8 158 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 NPIPA2E9PIF3 369 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 NPIPA3F8WFD2 350 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 H3BML4 177 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 ETV2O00321 342 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 MFNGO00587 321 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 TOX3O15405 576 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 RRP8O43159 456 aaKnown RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 SSX5O60225 188 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 LMX1BO60663 402 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 EIF1BO60739 113 aaKnown RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 ZNF354AO60765 605 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 FBXO24O75426 580 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 DHRS3O75911 302 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 ZFAND5O76080 213 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 VAMP5O95183 116 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 HTR3BO95264 441 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 TSPAN15O95858 294 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CSTBP04080 98 aaKnown RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 S100A8P05109 93 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 SERPINA5P05154 406 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 HEXAP06865 529 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CTSDP07339 412 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 HOXB5P09067 269 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 SFTA3P0C7M3 94 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 PGA4P0DJD7 388 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 PGA3P0DJD8 388 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 ICAM2P13598 275 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 HLA-DOBP13765 273 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 FOLR2P14207 255 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 PRF1P14222 555 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 HOXB1P14653 301 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 ABOP16442 354 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 MSR1P21757 451 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CCL1P22362 96 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 PAX6P26367 422 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CHATP28329 748 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 BLVRBP30043 206 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 RPL12P30050 165 aaKnown RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 RPL35P42766 123 aaKnown RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 OR3A4PP47883 348 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CSNK1A1P48729 337 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 CAMLGP49069 296 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 SULT1A2P50226 295 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 RAB13P51153 203 aa2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 DVL1P1P54792 670 aaPredicted RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 SNU13P55769 128 aaKnown RBP2.95□□□□□ -1.94
HMGN1P18-201ENST00000457642 OR1D5P58170 312 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms