RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 ORC5O43913 435 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CTAG2O75638 210 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SFTPCP11686 197 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 FCGR2AP12318 317 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CBR1P16152 277 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CRABP1P29762 137 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SFTPDP35247 375 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SOX6P35712 828 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SSBP1Q04837 148 aaKnown RBP4.24□□□□□ -1.73
RIF1-207ENST00000454583 MRPL49Q13405 166 aaKnown RBP4.24□□□□□ -1.73
RIF1-207ENST00000454583 CCDC157Q569K6 752 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 BAIAP2L2Q6UXY1 529 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 RTN4RL2Q86UN3 420 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CD163Q86VB7 1156 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 OR8B12Q8NGG6 310 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 AP3S1Q92572 193 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 MED30Q96HR3 178 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SFXN2Q96NB2 322 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 KCNN2Q9H2S1 579 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 OBP2BQ9NPH6 170 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 DAPK2Q9UIK4 370 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SLC22A13Q9Y226 551 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 ARFGEF3Q5TH69 2177 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 KNTC1P50748 2209 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 TRRAPQ9Y4A5 3859 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 DYSFO75923 2080 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 TMEM272A0A1B0GTI8 110 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 PNMA8CA0A1B0GUJ8 204 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 PQLC2LA1A4F0 135 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 BLOC1S5-TXNDC5H3BN57 136 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 RER1O15258 196 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 XRCC3O43542 346 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SSX5O60225 188 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CST4P01036 141 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 SLC2A2P11168 524 aaPredicted RBP4.24□□□□□ -1.73
RIF1-207ENST00000454583 PRF1P14222 555 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 PLA2G2AP14555 144 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 HLA-GP17693 338 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 RAB6AP20340 208 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 PITPNBP48739 271 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 OR2B6P58173 313 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CAMK2DQ13557 499 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 CR1LQ2VPA4 569 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 OTPQ5XKR4 325 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 PAMR1Q6UXH9 720 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 C9orf62Q8N4C0 152 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 HTRA1Q92743 480 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 PSMG3-AS1Q96PY0 264 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 FOXB1Q99853 325 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 C7orf50Q9BRJ6 194 aaKnown RBP4.24□□□□□ -1.73
RIF1-207ENST00000454583 NAA11Q9BSU3 229 aaPredicted RBP4.24□□□□□ -1.73
RIF1-207ENST00000454583 OPN3Q9H1Y3 402 aaPredicted RBP4.24□□□□□ -1.73
RIF1-207ENST00000454583 RNF121Q9H920 327 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 GRHPRQ9UBQ7 328 aa4.24□□□□□ -1.73
RIF1-207ENST00000454583 B8ZZF3 427 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 ZNF593O00488 134 aaPredicted RBP4.23□□□□□ -1.73
RIF1-207ENST00000454583 MLNRO43193 412 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 IFNGP01579 166 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 DANCRP0C864 163 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 HSMCR30P0CW71 290 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 RAB3BP20337 219 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 MSR1P21757 451 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 VAMP1P23763 118 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 RPS27P42677 84 aaKnown RBP4.23□□□□□ -1.73
RIF1-207ENST00000454583 GBX2P52951 348 aaPredicted RBP4.23□□□□□ -1.73
RIF1-207ENST00000454583 BLVRAP53004 296 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 DGCR2P98153 550 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 IL15RAQ13261 267 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 NHLRC3Q5JS37 347 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 TIMM23BQ5SRD1 257 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 NCMAPQ5T1S8 102 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 TMEM225Q6GV28 225 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 PYHIN1Q6K0P9 492 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 CEACAM19Q7Z692 300 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 DPPA2Q7Z7J5 298 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 CXorf67Q86X51 503 aaPredicted RBP4.23□□□□□ -1.73
RIF1-207ENST00000454583 OR11H4Q8NGC9 324 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 OR2T4Q8NH00 348 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 SYNPRQ8TBG9 265 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 TRMT10AQ8TBZ6 339 aaKnown RBP4.23□□□□□ -1.73
RIF1-207ENST00000454583 TMEM171Q8WVE6 324 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 SARAFQ96BY9 339 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 C10orf35Q96D05 121 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 ORAI1Q96D31 301 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 SLAMF6Q96DU3 332 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 INTS14Q96SY0 518 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 BRD7Q9NPI1 651 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 IL36GQ9NZH8 169 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 EMC3Q9P0I2 261 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 DNAJC13O75165 2243 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 APC2O95996 2303 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 A0A0A6YYJ9 748 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 IQCF6A8MYZ5 107 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 GABARAPH6UMI1 98 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 SLC17A2O00624 439 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 GMFGO60234 142 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 SLC16A7O60669 478 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 SERPINA3P01011 423 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 LMO1P25800 156 aa4.23□□□□□ -1.73
RIF1-207ENST00000454583 CALRP27797 417 aaKnown RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms