RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 NOX4Q9NPH5 578 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 FZR1Q9UM11 496 aa9.45□□□□□ -0.9
SCN9A-205ENST00000454569 ARFGEF3Q5TH69 2177 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 TRAV8-7A0A075B6U6 113 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 TRBV5-7A0A0A0MS05 114 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 A0A0U1RQV5 110 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 hCG_38984A0A1B0GV85 526 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 ZNF879B4DU55 563 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 PLAUP00749 431 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 OCM2P0CE71 109 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 CD53P19397 219 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 ACHEP22303 614 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 LOXP28300 417 aaPredicted RBP9.44□□□□□ -0.9
SCN9A-205ENST00000454569 FGF9P31371 208 aaPredicted RBP9.44□□□□□ -0.9
SCN9A-205ENST00000454569 MPV17P39210 176 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 PEX19P40855 299 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 LSAMPQ13449 338 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 YIF1BQ5BJH7 314 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 TMEM244Q5VVB8 128 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 ZNF704Q6ZNC4 412 aaPredicted RBP9.44□□□□□ -0.9
SCN9A-205ENST00000454569 Q6ZSR3 168 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 NR2C2APQ86WQ0 139 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 DMRTC2Q8IXT2 367 aaPredicted RBP9.44□□□□□ -0.9
SCN9A-205ENST00000454569 MS4A15Q8N5U1 240 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 OR52H1Q8NGJ2 320 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 OR1J1Q8NGS3 322 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 SLC25A40Q8TBP6 338 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 DYNC2LI1Q8TCX1 351 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 HAVCR2Q8TDQ0 301 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 SPSB4Q96A44 273 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 APOBEC3DQ96AK3 386 aaPredicted RBP9.44□□□□□ -0.9
SCN9A-205ENST00000454569 FGGYQ96C11 551 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 GFI1Q99684 422 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 OR2J1Q9GZK6 312 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 OR10A2Q9H208 303 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 MOB1AQ9H8S9 216 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 TBCCD1Q9NVR7 557 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 HHLA2Q9UM44 414 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 V9GYS6 101 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 CACNA1DQ01668 2161 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 DOPEY2Q9Y3R5 2298 aa9.44□□□□□ -0.9
SCN9A-205ENST00000454569 TUBAL3A6NHL2 446 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 SYT7O43581 403 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 APOC1P02654 83 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 HLA-DPB1P04440 258 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 UCHL1P09936 223 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 UBCP0CG48 685 aaKnown RBP9.43□□□□□ -0.9
SCN9A-205ENST00000454569 FAHP16930 419 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 PAX7P23759 505 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 RPS19P39019 145 aaKnown RBP9.43□□□□□ -0.9
SCN9A-205ENST00000454569 GSK3AP49840 483 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 CAV3P56539 151 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 PPP1CBP62140 327 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 NKX6-1P78426 367 aaPredicted RBP9.43□□□□□ -0.9
SCN9A-205ENST00000454569 SORDQ00796 357 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 TRAM1Q15629 374 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 DGUOKQ16854 277 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 C3orf36Q3SXR2 165 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 Q499Y3 187 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 NCMAPQ5T1S8 102 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 LRP11Q86VZ4 500 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 COMMD2Q86X83 199 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 OR51A2Q8NGJ7 313 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 OR13C3Q8NGS6 347 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 GPR148Q8TDV2 347 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 TSEN15Q8WW01 171 aaKnown RBP9.43□□□□□ -0.9
SCN9A-205ENST00000454569 TMEM106AQ96A25 262 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 CMBLQ96DG6 245 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 PLPPR2Q96GM1 343 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 MARS2Q96GW9 593 aaKnown RBP9.43□□□□□ -0.9
SCN9A-205ENST00000454569 ZNF275Q9NSD4 429 aaPredicted RBP9.43□□□□□ -0.9
SCN9A-205ENST00000454569 GSTK1Q9Y2Q3 226 aa9.43□□□□□ -0.9
SCN9A-205ENST00000454569 A0A1B0GVI7 797 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-205ENST00000454569 DEFB108AA8MXU0 73 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 ABCD4O14678 606 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 NCR1O76036 304 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 PPP3CBP16298 524 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 IGFBP2P18065 325 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 ADRA2CP18825 462 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 SDC2P34741 201 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 MXD1Q05195 221 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 DOK3Q7L591 496 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 LILRB1Q8NHL6 650 aaPredicted RBP9.42□□□□□ -0.9
SCN9A-205ENST00000454569 RADILQ96JH8 1075 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 TAS2R4Q9NYW5 299 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 DHDHQ9UQ10 334 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 AKAP6Q13023 2319 aa9.42□□□□□ -0.9
SCN9A-205ENST00000454569 A0A1W2PPR1 153 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CLEC18AA5D8T8 446 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 SHISA9B4DS77 424 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 XRCC2O43543 280 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 DHRS3O75911 302 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CLPXO76031 633 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CDRT1O95170 752 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 CRYAAP02489 173 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 IGFBP3P17936 291 aaPredicted RBP9.41□□□□□ -0.9
SCN9A-205ENST00000454569 GALP22466 123 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 THBS4P35443 961 aa9.41□□□□□ -0.9
SCN9A-205ENST00000454569 SOX6P35712 828 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms