RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 ECH1Q13011 328 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KCNMB1Q16558 191 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GPR139Q6DWJ6 353 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC35E4Q6ICL7 350 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DNM1P34Q6PK57 102 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 WDR82Q6UXN9 313 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GDPGP1Q6ZNW5 385 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SLC15A3Q8IY34 581 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BATF2Q8N1L9 274 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PROKR2Q8NFJ6 384 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TSPEARQ8WU66 669 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NKX3-1Q99801 234 aaPredicted RBP4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SH3GL1Q99961 368 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 IFT27Q9BW83 186 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PAPOLGQ9BWT3 736 aaKnown RBP4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NDEL1Q9GZM8 345 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR52D1Q9H346 318 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 EGLN3Q9H6Z9 239 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BRD7Q9NPI1 651 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 AURKAIP1Q9NWT8 199 aaPredicted RBP4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CYB5R1Q9UHQ9 305 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 B9D1Q9UPM9 204 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TMEM5Q9Y2B1 443 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CAPN7Q9Y6W3 813 aa4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 EPPK1P58107 5090 aaKnown RBP4.9□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DNAH1Q9P2D7 4330 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 A0A1B0GVI7 797 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 A0A1W2PQ09 198 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 A0A1W2PRQ8 180 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BBIP1A8MTZ0 92 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 BHLHE40O14503 412 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PTP4A3O75365 173 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SOX14O95416 240 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PTBP3O95758 552 aaKnown RBP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TXNDC12O95881 172 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RENP00797 406 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ANXA2P07355 339 aaKnown RBP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 VSIG8P0DPA2 414 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CD28P10747 220 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TUBG1P23258 451 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NOS3P29474 1203 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CEBPDP49716 269 aaPredicted RBP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NPY4RP50391 375 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NUDT2P50583 147 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RPS6KA3P51812 740 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 EFNB2P52799 333 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TPTEP56180 551 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ERVFRD-1P60508 538 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DGCR6Q14129 220 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KCNJ8Q15842 424 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DGUOKQ16854 277 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FBLN7Q53RD9 439 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KPRPQ5T749 579 aaPredicted RBP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CD276Q5ZPR3 534 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 STUMQ69YW2 141 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 HCP5Q6MZN7 132 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DPY19L2P2Q6ZN68 376 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 Q6ZTK2 550 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CBLL1Q75N03 491 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RRM2BQ7LG56 351 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DCXRQ7Z4W1 244 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CYP4Z1Q86W10 505 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TMEM219Q86XT9 240 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C11orf53Q8IXP5 236 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CELF2-AS1Q8N7Q2 184 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF511Q8NB15 262 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR9Q2Q8NGE9 314 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR8D4Q8NGM9 314 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR4C13Q8NGP0 309 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR6K6Q8NGW6 343 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR2AJ1Q8NGZ0 328 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 OR8S1Q8NH09 359 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 STON2Q8WXE9 905 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 LRTOMTQ8WZ04 291 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 RPL3LQ92901 407 aaKnown RBP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TNFRSF14Q92956 283 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 PHF21AQ96BD5 680 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 AJUBAQ96IF1 538 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 GAFA1Q96PS6 74 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 AMELYQ99218 206 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KCTD14Q9BQ13 255 aaPredicted RBP4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FUZQ9BT04 418 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 MMP28Q9H239 520 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 DPAGT1Q9H3H5 408 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 C16orf95Q9H693 158 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TUBG2Q9NRH3 451 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CENPMQ9NSP4 180 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF446Q9NWS9 450 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 FAM53CQ9NYF3 392 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 ZNF391Q9UJN7 358 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 KPTNQ9Y664 436 aa4.89□□□□□ -1.63
HLA-DPA3-207ENST00000454398 hCG_38984A0A1B0GV85 526 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 NKX6-3A6NJ46 265 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 CDIPTO14735 213 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 AKR7A2O43488 359 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 AHCYL1O43865 530 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 TSPAN9O75954 239 aa4.88□□□□□ -1.63
HLA-DPA3-207ENST00000454398 SASH3O75995 380 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms