RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 A0A1W2PPW3 197 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 OR4C45A6NMZ5 311 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 H3BSA7 217 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 AIREO43918 545 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 RGS9O75916 674 aaPredicted RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 ZFPL1O95159 310 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 GABARAPO95166 117 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 IGHV3-13P01766 116 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 ISG15P05161 165 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 TUBG1P23258 451 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 GADD45AP24522 165 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 CDKN1AP38936 164 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 ALDH3B1P43353 468 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 NANOS3P60323 173 aaKnown RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 MALLQ13021 153 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 PSG7Q13046 419 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 GFOD2Q3B7J2 385 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 ELMOD2Q8IZ81 293 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 PRSS35Q8N3Z0 413 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 CCDC54Q8NEL0 328 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 SGK3Q96BR1 496 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 HAVCR1Q96D42 359 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 DGCR14Q96DF8 476 aaKnown RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 PGLYRP3Q96LB9 341 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 TMED9Q9BVK6 235 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 PBOV1Q9GZY1 135 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 OR10A2Q9H208 303 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 G6PC2Q9NQR9 355 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 TUBG2Q9NRH3 451 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 TAAR3PQ9P1P4 343 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 RSL24D1Q9UHA3 163 aaKnown RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 ZNF391Q9UJN7 358 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 GSTK1Q9Y2Q3 226 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 SF3B6Q9Y3B4 125 aaKnown RBP11.15□□□□□ -0.62
VPS33A-202ENST00000451053 CEPT1Q9Y6K0 416 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 CACNA1DQ01668 2161 aa11.15□□□□□ -0.62
VPS33A-202ENST00000451053 PLCE1Q9P212 2302 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 DCHS2Q6V1P9 2916 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 A0A0U1RQV5 110 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 CYSRT1A8MQ03 144 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 OVOL3O00110 214 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 XRCC2O43543 280 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 GATBO75879 557 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 TTRP02766 147 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 RAC2P15153 192 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 ZNF12P17014 697 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 KITLGP21583 273 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 ACHEP22303 614 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 MAPK3P27361 379 aaPredicted RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 KIR3DL2P43630 455 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 EVX1P49640 407 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 SELENOVP59797 346 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 SNRPD2P62316 118 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 RPS25P62851 125 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 OR2T2Q6IF00 324 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 CD200R1LQ6Q8B3 271 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 MRPL21Q7Z2W9 205 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 CDH24Q86UP0 819 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 OR5AS1Q8N127 324 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 GPR148Q8TDV2 347 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 PHYHIPQ92561 330 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 ITFG2Q969R8 447 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 TMEM203Q969S6 136 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 SPSB4Q96A44 273 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 ISOC1Q96CN7 298 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 REEP6Q96HR9 211 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 LYZL4Q96KX0 146 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 PDCD1LG2Q9BQ51 273 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 CHCHD6Q9BRQ6 235 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 REPIN1Q9BWE0 567 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 CACNG6Q9BXT2 260 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 RGCCQ9H4X1 137 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 EXOSC4Q9NPD3 245 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 PURGQ9UJV8 347 aaKnown RBP11.14□□□□□ -0.63
VPS33A-202ENST00000451053 HHLA2Q9UM44 414 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 SLC22A13Q9Y226 551 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 CRYBG3Q68DQ2 2970 aa11.14□□□□□ -0.63
VPS33A-202ENST00000451053 DSCAMO60469 2012 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 LOC100506127A0A0U1RQW1 187 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 A0A1B0GVI7 797 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 SLC22A1O15245 554 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 TIMM8AO60220 97 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-202ENST00000451053 ARL6IP5O75915 188 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 CFL1P23528 166 aaKnown RBP11.13□□□□□ -0.63
VPS33A-202ENST00000451053 DNASE1P24855 282 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 FGF9P31371 208 aaPredicted RBP11.13□□□□□ -0.63
VPS33A-202ENST00000451053 CRYBB2P43320 205 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 NKPD1Q17RQ9 610 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 SLC16A12Q6ZSM3 486 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 PGAP1Q75T13 922 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 COMMD2Q86X83 199 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 SOX7Q9BT81 388 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 OR51E2Q9H255 320 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 DYNLRB1Q9NP97 96 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 CELSR2Q9HCU4 2923 aa11.13□□□□□ -0.63
VPS33A-202ENST00000451053 ASH1LQ9NR48 2969 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms