RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 HOXC8P31273 242 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 PNLIPRP3Q17RR3 467 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 TMPRSS11FQ6ZWK6 438 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 TMEM179BQ7Z7N9 219 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 SPNS2Q8IVW8 549 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 NUDCD2Q8WVJ2 157 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 PINX1Q96BK5 328 aaKnown RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 OR8B4Q96RC9 309 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 RNF167Q9H6Y7 350 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 LRP12Q9Y561 859 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 KRBOX1C9JBD0 128 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 PCBP4P57723 403 aaKnown RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 BPIFB3P59826 476 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 NKG7Q16617 165 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 ANKRD34AQ69YU3 496 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 TMEM108Q6UXF1 575 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 VASH2Q86V25 355 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 SPSB1Q96BD6 273 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 CFHR5Q9BXR6 569 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 STRAPQ9Y3F4 350 aaKnown RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 CSAG2Q9Y5P2 127 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 ZNF705GA8MUZ8 300 aaPredicted RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 CALHM3Q86XJ0 350 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 GNPNAT1Q96EK6 184 aaPredicted RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 FYTTD1Q96QD9 318 aaKnown RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 NMES1Q9C002 83 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 MYO5AQ9Y4I1 1855 aaKnown RBP9.16□□□□□ -0.94
SCN10A-201ENST00000449082 OR5G3P0C626 314 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 PRR35P0CG20 571 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 ADIRFQ15847 76 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 MICBQ29980 383 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 OR10D3Q8NH80 312 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 HMGCLL1Q8TB92 370 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 TCEAL7Q9BRU2 100 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 ONECUT1Q9UBC0 465 aa9.16□□□□□ -0.94
SCN10A-201ENST00000449082 GABRA1P14867 456 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 RNF165Q6ZSG1 346 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 PRSS41Q7RTY9 318 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 MOB3BQ86TA1 216 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 TRAV1-2A0A0B4J238 106 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SERPINE3A8MV23 424 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SSSCA1O60232 199 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 METTL15P1P0C7V9 234 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 GLI4P10075 376 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 HRH1P35367 487 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 ASAH1Q13510 395 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 DBX2Q6ZNG2 339 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SMRP1Q8NCR6 262 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 ZNF251Q9BRH9 671 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 NDFIP1Q9BT67 221 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 DNAJB12Q9NXW2 375 aaKnown RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 H2AFB1P0C5Y9 115 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 TMIGD3P0DMS9 266 aaPredicted RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SSBP1Q04837 148 aaKnown RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 BATFQ16520 125 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 HFEQ30201 348 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SLC7A5P1Q8MH63 180 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 ZNF439Q8NDP4 499 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 OR13G1Q8NGZ3 307 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 OR4C3Q8NH37 302 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 TMEM230Q96A57 120 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 FSCN3Q9NQT6 498 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 ZNF71Q9NQZ8 489 aaPredicted RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 NUP205Q92621 2012 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 A0A1B0GTQ1 180 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 JTBO76095 146 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SOX18P35713 384 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 ACOT6Q3I5F7 207 aaPredicted RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 TMEM182Q6ZP80 229 aaPredicted RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 APOBEC4Q8WW27 367 aaKnown RBP9.15□□□□□ -0.94
SCN10A-201ENST00000449082 SOX7Q9BT81 388 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 OSGIN2Q9Y236 505 aa9.15□□□□□ -0.94
SCN10A-201ENST00000449082 FXYD1O00168 92 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 NUPL2O15504 423 aaKnown RBP9.15□□□□□ -0.95
SCN10A-201ENST00000449082 CD82P27701 267 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 HOXD12P35452 270 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 MPPED2Q15777 294 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 OIT3Q8WWZ8 545 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 DDOQ99489 341 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 RNF150Q9ULK6 438 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 ABCA3Q99758 1704 aa9.15□□□□□ -0.95
SCN10A-201ENST00000449082 C21orf140B9A014 251 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 M6PRP20645 277 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 TCTN1Q2MV58 587 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 OR2Y1Q8NGV0 311 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 MITD1Q8WV92 249 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 SLC35B4Q969S0 331 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 ADAM19Q9H013 955 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 DUSP15Q9H1R2 295 aaPredicted RBP9.14□□□□□ -0.95
SCN10A-201ENST00000449082 C12orf10Q9HB07 376 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 GLRX2Q9NS18 164 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 MED9Q9NWA0 146 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 IL20Q9NYY1 176 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 SIGLEC7Q9Y286 467 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 MT-ND4LP03901 98 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 TIGD3Q6B0B8 471 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 ZNF547Q8IVP9 402 aa9.14□□□□□ -0.95
SCN10A-201ENST00000449082 SLC38A6Q8IZM9 456 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms